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P75616 is a cross-reference for YP_002925207.1, which is included in NRDB40.

SetShortcutsAcc.No.IdentifierDatabaseDescription
NRDB40IBPYP_002925207.1 238899411 RefSeqhypothetical protein BWG_0005 [Escherichia coli BW2952]

PSI-BLAST Results for YP_002925207.1 against NRDB40

Filtering conditions for the hit sequences

  • E-value is less than
Matches:
Match Overview | Stacked Multiple Alignment | Pairwise Alignments

Match Overview

198
 Score E-value Shortcuts Acc.No. Description
-IBP YP_002925207.1hypothetical protein BWG_0005 [Escherichia coli BW2952]
175 2E-11 IBP C4UPW4Putative uncharacterized protein - Yersinia rohdei ATCC 43380
158 2E-09 IBP ZP_04517473.1putative exported protein [Yersinia pestis Nepal516]
155 4E-09 IBP YP_001006436.1hypothetical protein YE2196 [Yersinia enterocolitica subsp. enterocolitica 8081]
154 5E-09 IBP YP_001436956.1hypothetical protein ESA_00849 [Enterobacter sakazakii ATCC BAA-894]
154 5E-09 IBP C4SKB9Putative uncharacterized protein - Yersinia frederiksenii ATCC 33641
153 7E-09 IBP C4UGB4Putative uncharacterized protein - Yersinia ruckeri ATCC 29473
148 2E-08 IBP YP_001175305.1hypothetical protein Ent638_0567 [Enterobacter sp. 638]
148 3E-08 IBP YP_001005543.1hypothetical protein YE1220 [Yersinia enterocolitica subsp. enterocolitica 8081]
145 5E-08 IBP YP_051692.1hypothetical protein ECA3604 [Pectobacterium atrosepticum SCRI1043]
144 8E-08 IBP C6CL11Putative uncharacterized protein - Dickeya zeae Ech1591
140 2E-07 IBP YP_002381236.1conserved hypothetical protein; putative exported protein [Escherichia fergusonii ATCC 35469]
141 2E-07 IBP C4S6V6Putative uncharacterized protein - Yersinia bercovieri ATCC 43970
139 3E-07 IBP YP_001177640.1hypothetical protein Ent638_2925 [Enterobacter sp. 638]
133 1E-06 IBP ZP_03283502.1hypothetical protein ENTCAN_03302 [Enterobacter cancerogenus ATCC 35316]
132 2E-06 IBP YP_002920609.1hypothetical protein KP1_3995 [Klebsiella pneumoniae NTUH-K2044]
133 2E-06 IBP YP_001569548.1hypothetical protein SARI_00477 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--]
129 4E-06 IBP C6CAS2Putative uncharacterized protein - Dickeya dadantii Ech703
108 0.001 IBP C4UGB4Putative uncharacterized protein - Yersinia ruckeri ATCC 29473
107 0.002 IBP C4S6V6Putative uncharacterized protein - Yersinia bercovieri ATCC 43970

Stacked Multiple Aligment

                                                         1         2         3         4         5         6         7         8         9        
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The representative sequence for the query:      MKKMQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQHYEWRGNRWHLHGPPPPPRHHKKAPHDHHGGHGPGKHHR
YP_002925207.1       hypothetical protein BWG_0 MKKMQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQHYEWRGNRWHLHGPPPPPRHHKKAPHDHHGGHGPGKHHR
C4UPW4               Putative uncharacterized p -----------------------------PGVSLHLGDQDKSGNYWDGYDWRPPQWWERGYYWDGSRW---QPPSAP---------------------
ZP_04517473.1        putative exported protein  -----------------------------PGINLHLGDQDKRGYYWDGYDWQPPQWWKRGYSWDGGRWQKPQIQQGRNPFREQNPQPPRGEGPQK---
YP_001006436.1       hypothetical protein YE219 -----------------------------PGVSLHLGDQDKRGYYWDGYDWRPPQWWERGYYWDGGRW------------------------------
YP_001436956.1       hypothetical protein ESA_0 -----------------------------PSIKLQIGDRDNYGNYWDGGRWRDRDYWRNHYEWRGDRWWRHD--------------------------
C4SKB9               Putative uncharacterized p -----------------------------PGISLHLGDQDNRGYYWDGYDWRPPQWWERGYYWDGGRW------------------------------
C4UGB4               Putative uncharacterized p -----------------------------PGISLQIGEQDKSGNYWDGYDWRDRQWWQRGHYWDGHRW------------------------------
YP_001175305.1       hypothetical protein Ent63 -----------------------------PAVKLQIGDRDDRGHHWDGGRWRDNDWWKSHYEWRDNRWHPHDDHRDRHDNRRDKPHDDRGHGP-----
YP_001005543.1       hypothetical protein YE122 -----------------------------PGVSLQIGEQDRSGNYWDGYDWRDQQWWQNGHYWDGHRWQHKD--------------------------
YP_051692.1          hypothetical protein ECA36 -----------------------------PGVTLNIGERDRRGNYWDGYDWRSERWWRHGYYWDGWRWRDAREWRESQRDRR----------------
C6CL11               Putative uncharacterized p -----------------------------PGVYLHIGDRDERGYYWDGNRWCDPDSW-----------------------------------------
YP_002381236.1       conserved hypothetical pro -----------------------------PAVKLQIGDRDNRGYYWDGGYWRDHGWWNKHYEWRGN--------------------------------
C4S6V6               Putative uncharacterized p -----------------------------PSVTLNIGEQDRSGNYWDGYDWRDRQWWRHGHYWDGHRWQGRD--------------------------
YP_001177640.1       hypothetical protein Ent63 -----------------------------PSVKLQIGDRDNSGNYWDGGGWRDRDYWNRNYEWRKNRWWRHDNGRHRGWDNR----------------
ZP_03283502.1        hypothetical protein ENTCA -----------------------------PSVKLQIGDRDNYGNYWDGGGWRDRDYWHHHYEWRKNRWWRHDNGYHRGWDKR----------------
YP_002920609.1       hypothetical protein KP1_3 -----------------------------PSVKLQIGDRDNYGNYWDGGSWRDRDYWRRHYEWRDNRWHRHD--------------------------
YP_001569548.1       hypothetical protein SARI_ -----------------------------PSIKLQIGDRDDYGNYWDGGRWRDRDYWHNHYQWRKNRWWRHDNGYHRGWDKRN---------------
C6CAS2               Putative uncharacterized p -----------------------------PGIYLHIGDRDDRGYYWDGDRWCDPDTW-----------------------------------------
C4UGB4               Putative uncharacterized p -----------------------------------LGERSQRGHYWDGHRWQDKVWWKKNYYYHDGR-------------------------------
C4S6V6               Putative uncharacterized p -----------------------------------LGERNRHGHYWDGHRWQGRDWWKKNYYYREGRY------------------------------

Pairwise Alignments

YP_002925207.1   hypothetical protein BWG_0005 [Escherichia coli BW2952]
Length: 98. Score: 216. Identity: 100%. E-value: 3E-16.
Query:      1 MKKMQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQHYEWRGNRWHLHGPPPPPRHHKKAPHDHHGGHGPGKHHR
Sbjct:      1 MKKMQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQHYEWRGNRWHLHGPPPPPRHHKKAPHDHHGGHGPGKHHR

C4UPW4   Putative uncharacterized protein - Yersinia rohdei ATCC 43380
Length: 169. Score: 175. Identity: 38%. E-value: 2E-11.
Query:     30 PSVKLQIGDRDNRGYYWDGGHWRDHGWW------------KQHYEWRGNRWHLHGPPPPP
Sbjct:     31 PGVSLHLGDQDKSGNYWDGYDWRPPQWWHEHRGGHIGDHNERGYYWDGSRW---QPPSAP

ZP_04517473.1   putative exported protein [Yersinia pestis Nepal516]
Length: 152. Score: 158. Identity: 29%. E-value: 2E-09.
Query:     30 PSVKLQIGDRDNRGYYWDGGHWRDHGWWK------------QHYEWRGNRWHLHGPPPPPRHHKKA--------PHDHHGGHGPGK
Sbjct:     29 PGINLHLGDQDKRGYYWDGYDWQPPQWWKDHRGAHIGERNERGYSWDGGRWQKPQIQQGRNPFREQDRGNGMNNNPQPPRGEGPQK

YP_001006436.1   hypothetical protein YE2196 [Yersinia enterocolitica subsp. enterocolitica 8081]
Length: 164. Score: 155. Identity: 43%. E-value: 4E-09.
Query:     30 PSVKLQIGDRDNRGYYWDGGHWRDHGWW------------KQHYEWRGNRW
Sbjct:     29 PGVSLHLGDQDKRGYYWDGYDWRPPQWWHEHRGGHIGDRNERGYYWDGGRW

YP_001436956.1   hypothetical protein ESA_00849 [Enterobacter sakazakii ATCC BAA-894]
Length: 123. Score: 154. Identity: 65%. E-value: 5E-09.
Query:     30 PSVKLQIGDRDNRGYYWDGGHWRDHGWWKQHYEWRGNRWHLHG
Sbjct:     34 PSIKLQIGDRDNYGNYWDGGRWRDRDYWRNHYEWRGDRWWRHD

C4SKB9   Putative uncharacterized protein - Yersinia frederiksenii ATCC 33641
Length: 161. Score: 154. Identity: 43%. E-value: 5E-09.
Query:     30 PSVKLQIGDRDNRGYYWDGGHWRDHGWW------------KQHYEWRGNRW
Sbjct:     29 PGISLHLGDQDNRGYYWDGYDWRPPQWWHEHRGAHIGDRNERGYYWDGGRW

C4UGB4   Putative uncharacterized protein - Yersinia ruckeri ATCC 29473
Length: 120. Score: 153. Identity: 39%. E-value: 7E-09.
Query:     30 PSVKLQIGDRDNRGYYWDGGHWRDHGWW------------KQHYEWRGNRW
Sbjct:     29 PGISLQIGEQDKSGNYWDGYDWRDRQWWQGHQGQDLGERSQRGHYWDGHRW

YP_001175305.1   hypothetical protein Ent638_0567 [Enterobacter sp. 638]
Length: 98. Score: 148. Identity: 56%. E-value: 2E-08.
Query:     30 PSVKLQIGDRDNRGYYWDGGHWRDHGWWKQHYEWRGNRWHLHGPPPPPRHHKKAPHDHHGGHGP
Sbjct:     30 PAVKLQIGDRDDRGHHWDGGRWRDNDWWKSHYEWRDNRWHPHDDHRDRHDNRRDKPHDDRGHGP

YP_001005543.1   hypothetical protein YE1220 [Yersinia enterocolitica subsp. enterocolitica 8081]
Length: 142. Score: 148. Identity: 38%. E-value: 3E-08.
Query:     30 PSVKLQIGDRDNRGYYWDGGHWRDHGWWKQ------------HYEWRGNRWHLHG
Sbjct:     49 PGVSLQIGEQDRSGNYWDGYDWRDQQWWQNHQGRDLGERNRHGHYWDGHRWQHKD

YP_051692.1   hypothetical protein ECA3604 [Pectobacterium atrosepticum SCRI1043]
Length: 140. Score: 145. Identity: 33%. E-value: 5E-08.
Query:     30 PSVKLQIGDRDNRGYYWDGGHWRDHGWW------------KQHYEWRGNRWHLHGPPPPPRHHKK
Sbjct:     32 PGVTLNIGERDRRGNYWDGYDWRSERWWQEHRGYNRGERNRHGYYWDGWRWRDAREWRESQRDRR

C6CL11   Putative uncharacterized protein - Dickeya zeae Ech1591
Length: 121. Score: 144. Identity: 64%. E-value: 8E-08.
Query:     30 PSVKLQIGDRDNRGYYWDGGHWRDHGWW
Sbjct:     32 PGVYLHIGDRDERGYYWDGNRWCDPDSW

YP_002381236.1   conserved hypothetical protein; putative exported protein [Escherichia fergusonii ATCC 35469]
Length: 99. Score: 140. Identity: 89%. E-value: 2E-07.
Query:     30 PSVKLQIGDRDNRGYYWDGGHWRDHGWWKQHYEWRGN
Sbjct:     30 PAVKLQIGDRDNRGYYWDGGYWRDHGWWNKHYEWRGN

C4S6V6   Putative uncharacterized protein - Yersinia bercovieri ATCC 43970
Length: 150. Score: 141. Identity: 38%. E-value: 2E-07.
Query:     30 PSVKLQIGDRDNRGYYWDGGHWRDHGWW------------KQHYEWRGNRWHLHG
Sbjct:     49 PSVTLNIGEQDRSGNYWDGYDWRDRQWWHDHQGRDLGERNRHGHYWDGHRWQGRD

YP_001177640.1   hypothetical protein Ent638_2925 [Enterobacter sp. 638]
Length: 115. Score: 139. Identity: 54%. E-value: 3E-07.
Query:     30 PSVKLQIGDRDNRGYYWDGGHWRDHGWWKQHYEWRGNRWHLHGPPPPPRHHKK
Sbjct:     28 PSVKLQIGDRDNSGNYWDGGGWRDRDYWNRNYEWRKNRWWRHDNGRHRGWDNR

ZP_03283502.1   hypothetical protein ENTCAN_03302 [Enterobacter cancerogenus ATCC 35316]
Length: 113. Score: 133. Identity: 60%. E-value: 1E-06.
Query:     30 PSVKLQIGDRDNRGYYWDGGHWRDHGWWKQHYEWRGNRWHLHGPPPPPRHHKK
Sbjct:     28 PSVKLQIGDRDNYGNYWDGGGWRDRDYWHHHYEWRKNRWWRHDNGYHRGWDKR

YP_002920609.1   hypothetical protein KP1_3995 [Klebsiella pneumoniae NTUH-K2044]
Length: 119. Score: 132. Identity: 74%. E-value: 2E-06.
Query:     30 PSVKLQIGDRDNRGYYWDGGHWRDHGWWKQHYEWRGNRWHLHG
Sbjct:     28 PSVKLQIGDRDNYGNYWDGGSWRDRDYWRRHYEWRDNRWHRHD

YP_001569548.1   hypothetical protein SARI_00477 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--]
Length: 108. Score: 133. Identity: 53%. E-value: 2E-06.
Query:     30 PSVKLQIGDRDNRGYYWDGGHWRDHGWWKQHYEWRGNRWHLHGPPPPPRHHKKA
Sbjct:     28 PSIKLQIGDRDDYGNYWDGGRWRDRDYWHNHYQWRKNRWWRHDNGYHRGWDKRN

C6CAS2   Putative uncharacterized protein - Dickeya dadantii Ech703
Length: 116. Score: 129. Identity: 60%. E-value: 4E-06.
Query:     30 PSVKLQIGDRDNRGYYWDGGHWRDHGWW
Sbjct:     34 PGIYLHIGDRDDRGYYWDGDRWCDPDTW

C4UGB4   Putative uncharacterized protein - Yersinia ruckeri ATCC 29473
Length: 120. Score: 108. Identity: 46%. E-value: 0.001.
Query:     36 IGDRDNRGYYWDGGHWRDHGWWKQHYEWRGNR
Sbjct:     64 LGERSQRGHYWDGHRWQDKVWWKKNYYYHDGR

C4S6V6   Putative uncharacterized protein - Yersinia bercovieri ATCC 43970
Length: 150. Score: 107. Identity: 42%. E-value: 0.002.
Query:     36 IGDRDNRGYYWDGGHWRDHGWWKQHYEWRGNRW
Sbjct:     84 LGERNRHGHYWDGHRWQGRDWWKKNYYYREGRY
PairsDB was developed by Prof. Liisa Holm and Dr. Andreas Heger, and it is maintained jointly with CSC.
The current PairsDB version is based on a sequence set collected on September 2009.