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P39404 is a cross-reference for ZP_03255490.1, which is represented by ZP_03441943.1 in NRDB40.

SetShortcutsAcc.No.IdentifierDatabaseDescription
NRDBIBPZP_03255490.1 208814161 RefSeqtranscriptional regulator, LuxR family [Escherichia coli O157:H7 str. EC4045]
NRDB40IBPZP_03441943.1 217325859 RefSeqtranscriptional regulator, LuxR family [Escherichia coli O157:H7 str. TW14588]

PSI-BLAST Results for ZP_03441943.1 against NRDB40

Filtering conditions for the hit sequences

  • E-value is less than
Matches:
[1-50][51-100] [101-150] [151-200] [201-250] [251-300] [301-350] [351-400] [401-450] [451-500] [501-550] [551-600] [601-650] [651-700] [701-750] [751-800] [801-850] [851-900] [901-950] [951-1000] [1001-1050] [1051-1100] [1101-1150] [1151-1200] [1201-1250] [1251-1300] [1301-1350] [1351-1400] [1401-1450] [1451-1500] [1501-1550] [1551-1600] [1601-1650] [1651-1700] [1701-1750] [1751-1800] [1801-1850] [1851-1900] [1901-1950] [1951-2000] [2001-2050] [2051-2100] [2101-2150] [2151-2200] [2201-2250] [2251-2300] [2301-2350] [2351-2400] [2401-2450] [2451-2500] [2501-2550] [2551-2600] [2601-2650] [2651-2700] [2701-2750] [2751-2800] [2801-2850] [2851-2900] [2901-2950] [2951-3000] [3001-3050] [3051-3100] [3101-3150] [3151-3200] [3201-3250] [3251-3300] [3301-3350] [3351-3400] [3401-3450] [3451-3500] [3501-3550] [3551-3600] [3601-3650] [3651-3700] [3701-3750] [3751-3800] [3801-3850] [3851-3900] [3901-3950] [3951-4000] [4001-4050] [4051-4100] [4101-4150] [4151-4200] [4201-4250] [4251-4300] [4301-4350] [4351-4400] [4401-4450] [4451-4500] [4501-4550] [4551-4600] [4601-4650] [4651-4700] [4701-4750] [4751-4800] [4801-4850] [4851-4900] [4901-4950] [4951-5000] [5001-5050] [5051-5100] [5101-5150] [5151-5200] [5201-5250] [5251-5300] [5301-5350] [5351-5400] [5401-5450] [5451-5500] [5501-5550] [5551-5600] [5601-5650] [5651-5700] [5701-5750] [5751-5800] [5801-5850] [5851-5900] [5901-5950] [5951-6000] [6001-6050] [6051-6100] [6101-6150] [6151-6200] [6201-6250] [6251-6300] [6301-6350] [6351-6400] [6401-6450] [6451-6500] [6501-6550] [6551-6600] [6601-6650] [6651-6700] [6701-6750] [6751-6800] [6801-6850] [6851-6900] [6901-6950] [6951-7000] [7001-7050] [7051-7100] [7101-7150] [7151-7200] [7201-7250] [7251-7300] [7301-7350] [7351-7400] [7401-7450] [7451-7500] [7501-7550] [7551-7600] [7601-7650] [7651-7700] [7701-7750] [7751-7800] [7801-7850] [7851-7900] [7901-7950] [7951-8000] [8001-8050] [8051-8100] [8101-8150] [8151-8200] [8201-8250] [8251-8300] [8301-8350] [8351-8400] [8401-8450] [8451-8500] [8501-8550] [8551-8600] [8601-8650] [8651-8700] [8701-8750] [8751-8800] [8801-8850] [8851-8900] [8901-8950] [8951-9000] [9001-9050] [9051-9100] [9101-9150] [9151-9200] [9201-9250] [9251-9300] [9301-9350] [9351-9400] [9401-9450] [9451-9500] [9501-9550] [9551-9600] [9601-9650] [9651-9700] [9701-9750] [9751-9800] [9801-9850] [9851-9900] [9901-9950] [9951-10000] [10001-10050] [10051-10100] [10101-10150] [10151-10200] [10201-10250] [10251-10300] [10301-10350] [10351-10400] [10401-10450] [10451-10500] [10501-10550] [10551-10600] [10601-10650] [10651-10700] [10701-10750] [10751-10800] [10801-10850] [10851-10890]
Match Overview | Stacked Multiple Alignment | Pairwise Alignments

Match Overview

1225
 Score E-value Shortcuts Acc.No. Description
-IBP NP_294711.1DNA-binding response regulator [Deinococcus radiodurans R1]
471 2E-45 IBP B5GEB8Two-component system response regulator - Streptomyces sp. SPB74
468 6E-45 IBP YP_002316936.1DNA-binding response regulator, NarL family (REC-HTH domains) [Anoxybacillus flavithermus WK1]
462 3E-44 IBP B4C6V0Two component transcriptional regulator, LuxR family - Cyanothece sp. PCC 7425
455 2E-43 IBP YP_612871.1two component LuxR family transcriptional regulator [Silicibacter sp. TM1040]
445 2E-42 IBP ZP_03492542.1two component transcriptional regulator, LuxR family [Alicyclobacillus acidocaldarius LAA1]
447 2E-42 IBP B3KFB6Response regulator receiver - Geobacillus sp. Y412MC10
444 3E-42 IBP YP_873518.1two component LuxR family transcriptional regulator [Acidothermus cellulolyticus 11B]
443 4E-42 IBP B2EMF7Two component transcriptional regulator, LuxR family - bacterium Ellin514
442 6E-42 IBP NP_630267.1two-component system response regulator [Streptomyces coelicolor A3(2)]
435 4E-41 IBP B3KB69Response regulator receiver - Geobacillus sp. Y412MC10
433 7E-41 IBP YP_677929.1response regulator [Cytophaga hutchinsonii ATCC 33406]
430 1E-40 IBP YP_181778.1LuxR family DNA-binding response regulator [Dehalococcoides ethenogenes 195]
427 3E-40 IBP YP_002367934.1Two-component protein Kinase [Bacillus cereus B4264]
428 3E-40 IBP YP_356401.1two component signal transduction response regulator [Pelobacter carbinolicus DSM 2380]
427 4E-40 IBP XP_001786429.1predicted protein [Physcomitrella patens subsp. patens]
421 1E-39 IBP B5GTH3Two component transcriptional regulator - Streptomyces clavuligerus ATCC 27064
423 1E-39 IBP B2EVT4Two component transcriptional regulator, LuxR family - bacterium Ellin514
420 2E-39 IBP ZP_02425159.1hypothetical protein ALIPUT_01296 [Alistipes putredinis DSM 17216]
420 2E-39 IBP ZP_03394528.1regulatory protein, LuxR:Response regulator receiver [Corynebacterium amycolatum SK46]
419 3E-39 IBP ZP_02928767.1two-component system regulatory protein [Verrucomicrobium spinosum DSM 4136]
418 4E-39 IBP YP_084610.1response regulator [Bacillus cereus E33L]
418 4E-39 IBP B1XRB7Response regulator receiver, LuxR domain - Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6)
413 1E-38 IBP YP_001618769.1DNA-binding response regulator [Sorangium cellulosum 'So ce 56']
413 2E-38 IBP ZP_01121787.1Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Robiginitalea biformata HTCC2501]
411 2E-38 IBP B1TR41Two component transcriptional regulator, LuxR family - Methylocella silvestris BL2
412 2E-38 IBP B4CVL8Two component transcriptional regulator, LuxR family - Chthoniobacter flavus Ellin428
411 2E-38 IBP ZP_02846382.1two component transcriptional regulator, LuxR family [Paenibacillus sp. JDR-2]
409 4E-38 IBP B5WKH1Two component transcriptional regulator, LuxR family - Burkholderia sp. H160
409 4E-38 IBP YP_001189662.1two component LuxR family transcriptional regulator [Pseudomonas mendocina ymp]
409 4E-38 IBP YP_001544334.1two component LuxR family transcriptional regulator [Herpetosiphon aurantiacus ATCC 23779]
408 5E-38 IBP YP_297621.1LuxR response regulator receiver [Ralstonia eutropha JMP134]
408 6E-38 IBP B1WQK4Two-component response regulator - Cyanothece (strain ATCC 51142)
406 8E-38 IBP YP_285549.1two component LuxR family transcriptional regulator [Dechloromonas aromatica RCB]
406 9E-38 IBP YP_676738.1two component LuxR family transcriptional regulator [Cytophaga hutchinsonii ATCC 33406]
406 9E-38 IBP YP_001266476.1two component LuxR family transcriptional regulator [Pseudomonas putida F1]
405 1E-37 IBP YP_001916925.1two component transcriptional regulator, LuxR family [Natranaerobius thermophilus JW/NM-WN-LF]
405 1E-37 IBP YP_001510595.1two component LuxR family transcriptional regulator [Frankia sp. EAN1pec]
405 1E-37 IBP YP_823030.1two component LuxR family transcriptional regulator [Solibacter usitatus Ellin6076]
404 1E-37 IBP YP_002061678.1DNA-binding response regulator NarL [Burkholderia mallei JHU]
406 1E-37 IBP YP_893776.1DNA-binding response regulator [Bacillus thuringiensis str. Al Hakam]
403 2E-37 IBP YP_823724.1two component LuxR family transcriptional regulator [Solibacter usitatus Ellin6076]
403 2E-37 IBP YP_298664.1two component LuxR family transcriptional regulator [Ralstonia eutropha JMP134]
404 2E-37 IBP YP_001433820.1two component LuxR family transcriptional regulator [Roseiflexus castenholzii DSM 13941]
401 3E-37 IBP YP_087470.1CitB protein [Mannheimia succiniciproducens MBEL55E]
401 4E-37 IBP YP_188953.1LuxR family DNA-binding response regulator [Staphylococcus epidermidis RP62A]
399 5E-37 IBP NP_959623.1NarL_1 [Mycobacterium avium subsp. paratuberculosis K-10]
399 5E-37 IBP NP_865127.1nitrate/nitrite regulatory protein narP [Rhodopirellula baltica SH 1]
399 6E-37 IBP YP_677878.1two-component response regulator [Cytophaga hutchinsonii ATCC 33406]
399 6E-37 IBP YP_516573.1hypothetical protein DSY0340 [Desulfitobacterium hafniense Y51]

Stacked Multiple Aligment

                                                                                                                                                   1         1         1         1         1         1         1         1         1         1         2         2         2     
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The representative sequence for the query:      MEHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETSNVLHPY
NP_294711.1          DNA-binding response regul -ENEAARPITLLLVDDHPVVRKGTRELLE--GETDLRVVGEAGSGEEALAQARSLTPDVIL--MDVSMPGMNGIEATKAIKAEQPSVGVLVLTSYDDDAYVFALLEAGAAGYLLKNASEDDLLGAVRAHPSIARKVLERFSVASTPTPPEDDLSPRELEVLRVAASGRTNKEIARDLDISPRTVQVHLANIFSKLGVGSRTEAVLHGIKRGWIDPR---------
B5GEB8               Two-component system respo --------IRVLLVDDQPLLRTGFRMILEAEPD--VAVVGEAGDGAQALDQVRALQPDVVL--MDIRMPRMDGVEATRQITERDGPVKVLVLTTFDLDEYVVEALRAGASGFLLKDAPAHELVQAIRVVASGEAMLAPSVTRRLQQPSSLQTLTEREVEVLKLVARGLSNAEIAADLFVSETTVKTHVGHVLTKLGLRDRVHAAVYAYESGLVSPCCTEPPGSP-
YP_002316936.1       DNA-binding response regul -ERGTTMKTRIVLIDDHKLFREGIKRILDFE--QDFEVVAEGSDGDEALALVERYKPDV--VIMDINMPHVNGVEATRQLIEAYPDTKVIILSIHDDESYVMHALQTGAMGYLLKEMDADALIEAVRVVAEGGSYLHPKVTHNLVKERPYHLLTRRECEVLQLLADGKSNKGIADALYISEKTVKNHVSNILQKLNVNDRTQAVVVAIKNGWVE-----------
B4C6V0               Two component transcriptio -------NIRVLIVDDHPVVRSGLAMIIQ--YAKGIETVGEASTGAEAVALFCQHRPDVVL--MDLKMPEMGGVEATQAILQECPNAYIIVLTTYDGDEDIYRGLQAGARGYLLKSVSREELIDGIKQVYAGRKYIPAEVGARLAERMSSPQLTERERQVLMLMCEGKSNQEIALTLQISEGTIKFHVNGILRKLDVCDRTQAVLVALKRGM-------------
YP_612871.1          two component LuxR family  -------PIRVLIVDDHPMVAEGIQSILESYGD--IEVVGAVSSGREAIARAEALVPDVIL--MDLNMPDVGGLSATEIIQERCPEIRVLILSMHDSPEYITTALSHGAVGYVLKDVQPEEIKTAIDAVMRGEQYLCTGAAGSLSPQSQTSRLTGREQTILLELAQGKSNKEVAQALDISVRTVETHRKNIKRKLGISSTAGLTRYALEHGVL------------
ZP_03492542.1        two component transcriptio -----MAHTRVVIVDDHALVRQGLRLIL--HGVAGIEVVGECSCGEDALKAAVKDRPDV--MLMDVHMPGLDGITTARHLRQIAPQVRVIMLTMFDDRAHVEKMLDAGVSGIVFKHDDSSEIVAAIQHGQPGRPYLSRRWGQRANPSRTAERLSPRETEVLVLLAQGYTNREVADALHISVKTVETHRQHIMRRIGLHSRAALVRYAYQNGLVDPP---------
B3KFB6               Response regulator receive --------IRLLVVDDHPVIRESLRTLLEEQ--QDFQVVGTAEDGEQAIELCRQVRPQ--LVLMDVEMPNLDGISASRTIKESWPHIRILILTTFEDTKQALEAMRSGVDGYLLKSMQPLELAETIRTVHRGGTLIDQGMSHKLFAQLEADNLTPRELEILQFVSEGLRYKSIASKLYLSDGTVRNYASSVYMKLGVRNREEAVQKAREAGLLE-----------
YP_873518.1          two component LuxR family  -------PIKVLVADDHALFRRGLEMVLRQEPD--IQLVAEASDGAEAVARAAETLPDVVL--LDVRMPKRTGIEACAAIKEVCPSAKIIMLTISDEEADLYEAIKAGAMGYLLKEISIDEVAAAIRAVHGGQSLISPSMASDARHQVPAPKLTEREMEVLRLVAKGLNNRDIAKQLFISENTVKNHVRNILEKLQLHSRMEAVVYAVREKLLE-----------
B2EMF7               Two component transcriptio --HKSMPNIRVLLADDHTVVRQGLRALLS--GEKDIQIVGEAGTGREAVQMAQKLTPDVIL--MDIAMPLMNGLEATRKIAEVAPSAKVLVLSSYGEDDYVQKLTEAGASGYLIKHAAANDLVAAVRETHKGNAFFSPGIAKRLRDQVRAGELTERELETLGHIVAGKPNKVIACDMGISIKTVEKHRQQVMNKLNIHEVASLTRYAIAKGMIDANGQSLMPNP-
NP_630267.1          two-component system respo --ASAPSKIRILLADDHALVRRGVRLILDREPD--LEVVAEAGDGAEAIDMARAHEAD--LAVLDIAMPRLTGLQAARELAALKPGLRILMLTMHDNEQYLFQALKSGACGYVLKSVADRDLVAACRAAMRDEPFLYPGDRVRHGEETSDHILTPREEEVLKLVAEGHSSKEIAEILFISIKTVQRHRANLLQKLGLRDRLELTRYAIRAGLIEP----------
B3KB69               Response regulator receive -----MGTIRILLADDHDMVRMGLKTYLSL--DPGFEVIGEAANGQEVVDMLREEADRPDLILMDLMMPVMNGAETTRAVMSEFPDQKIVILTSFLEDELVVECIEAGAVSYVLKTVSADELIYALQGAFRGMPVMTKDVSEALTRNGDESGLTEREKEVLLLIAEGKSNKEIGEELHISIKTVKTHVSNLLMKCELEDRTQLAIYAHRKGWV------------
YP_677929.1          response regulator [Cytoph -----MKKINILLVDDHTIVRDGIKATLKDQ--KNFHIVGEAANGLDGIEAVKQLKPDV--VIMDITMPEMSGIEAADVISKKYPDSKVLILSMHDNETYILKSVEAGAYGYLLKDVDKDEFIKAITAVYNGDKYFNQTDSIQSGYSNDEYELTKREKGILKMITDGKNNREIADGLGISIRTIETHRANIMKKLKVKNAVELVRIAI-----------------
YP_181778.1          LuxR family DNA-binding re --------ISIVLADDHQIVRHGLKALLEAEAD--FEVVGEASDGIEAVNLVESLQPGV--LVTDLMMGGMSGIEVTYQVVKRSPKTAVVILSMYGNEAYVHEALRAGARAYVLKDSTSEELVRSVREAVQGHRYLSSPLSEKAIEADPYETLTIREREVLHLVAQGHTCAEIAERLFISPRTVEVHRANMMRKLDLRNQTQLLRYALQRGIIPPEN--------
YP_002367934.1       Two-component protein Kina --------IRLLIVDDQPFVRESLRTLLDR--YEDLNVVGLAEDGNEAIDLCGRLQPHVIL--MDLDMQHMDGVEATKKIKQQWPHIRILIFTTFQDTEQALESLRNGADGFLLKSIETLELANTIRLIHKGGTLIDQGMSHKPQSKATAYELTAREIEILQLVAKGLRYTTIASRLYLSNGTVRNYASTAYTKLGVRNKEEAVQKALEIGIIE-----------
YP_356401.1          two component signal trans ---PKSPPFKVFLADDHPLLRTGLRMSLSRFADIDF--IGEASDGFKAVEKIKQNPPDVALI--DVDMPGLSGIAAVRMLRKQYPDMTLLILSSYSDKHFIEEAMQAGADGYVLKSIDINELADLIRAFSCGEHPMSPEESPADKDDESDAFLTRREQQILSCLAQGQGNKEISNALFISTETVKTHIKNIFKKLEVKSRLEAVIAAKEKKLID-----------
XP_001786429.1       predicted protein [Physcom --------IRLLVVDDHPVIRESLRTLLEEQ--QDFQVVGTAEDGEQAIELCRQLRPQ--LVLMDVDMPIVDGISASRTIKESWPHIRILILTTFEDTKQALEALRSGVDGYLLKSMQPLELAETIRTVHRGGTLIEQGMSHKLFAQLEADNLTPRELEILQFVSKGLRYKSIASNFYLSDGTVRNYASSAYLKLGVRNREEA----------------------
B5GTH3               Two component transcriptio ---TRTGPVTVLIADDQPLVRQGIGLIVRAAP--EFRVVGEVDDGEQAVAAAHRLRPDVVL--MDIRMPVLDGVAATERLTAELPGCRVLALSTFDMDEHVVRALRAGASGFLPKDVSPEELTAALRTVSAGDAVVAPRLPQRTTEEVRLDGLTPRETEVLRLIATGLDNTGIAEELGIGVQTVKNHITSVFAKLGLRDRAQAVISAYESGLVSPR---------
B2EVT4               Two component transcriptio ------SPLRILIVDDHAIIRQGLKQILA--GEFGLGVFGEANNGTEALEQIWKQSWDVVL--LDITMPGKSGLDVLKQIVEAQPNMAVLVLSMHPEDQYAVRVLKTGAAGYITKNTASEEVVNAVKKVLAGGKYVSASLAENLATKAPHEILSDREYQVMRLIALGKSVKEIAFDLSLSVKTISTYRTRIMEKMKFKTNADIIRYAVHERLVD-----------
ZP_02425159.1        hypothetical protein ALIPU ---------RIILVDDHSLFRSGMRGLLDR--YDGIRVVGEASTGEEFLAMLPATEADV--VFMDFAMPGMNGAETTEKALALEPGLKVITLSMFGDENYYSRMVQAGAKGFLMKDSPMDEVLRAIETVAAGGTYFCEEVLRSLASRGSDERLSTREIEILVCVCRGLSNQEIADELFISKRTVDKHRANILEKTGCKNTASLVVYAVRHGLVD-----------
ZP_03394528.1        regulatory protein, LuxR:R -----MSDIKVLIVDDDPLVLSTLRTYFKKAPH--ITVVDEASDGHEALNIIA--RGGVDVVLTDIHMPNMDGVELLERIKKVENPPKFIAITSFDTDETMLKILSLGGNGYILKTARPESVIGTIEDVFQGGTVISPISATRLIKTLPSRKITQAEREVLGLICRGKSNHDIAKELGKSPGTIKKHLSSMFNKFGATSRLDLALKAIDAGFQPPASAA------
ZP_02928767.1        two-component system regul ----MTSPLTLLIVDDHFVVRSGLVAALEIEDD--IDIIGEAKRGDQALEAYQRLRPSVVL--MDLQLPGLSGVQATAAICAHDPEARILVFSTFSHEDEILSALNAGAAGYVQKSSTREELLDALRRVAAGGTSLPPDLAQRLESQRIRLTVTPREREVLELIASGQSNKRIAAAIGITEDTVKRHVTHILEKLGVNDRAQATAEAIRRGIIRPP---------
YP_084610.1          response regulator [Bacill --------IRLLVVDDQALITNSLEQILENQ--TDFIVAGKAYDGSEALILCEQLEPDIVL--MDIQMPEMNGIEALLEMKRRWPNMKIVLMTTFEDSLQAATALEHGAEGYMLKSIHPQEMKEALRIFEEMKLQREQLAKIKSTKQTFPYGLTKREMEILEHLSNGLRYKSIAAKLFLSEGTIRNYCSNLYSKLGVSNREEAIKMAR-----------------
B1XRB7               Response regulator receive ----MTSPLKVLLIEDDELFRLGLATRLQQE--ALLEITAEAEDGETALDLI--TKQEFDIIILDVGLPGIGGVETCRQIKQQQPQLPILVLTSHSQPTLINRLIEAQAQGYCLKGVDAESLILAIQSIAAGASWWDPMAEMPRSVPAQDNPLTQREGEILALIANGKSNSEIAETLYIAASTVRVHVHAILQKLEARDRTQAVVIALRHGLI------------
YP_001618769.1       DNA-binding response regul MAETPASKLHIYLIDDHPVVREGFARALSDEPD--MVVVGQAGTAADALRETASCKPDVVLV--DLNIPDRDGIELLGALRAQLPQAKLLVLSGYDDEFRVAEALRAGAQGYLVKTSKLEEVIEGIRRIATGGAPLSSSIAGAVVRAMRLDALTPRERQVLRLLAAGVSTRETAARLTISPKTVETHRVRIYAKLGCKSAVELTRIAVRTGLIE-----------
ZP_01121787.1        Response regulator contain --------IRIALVDDHRLFLEGIRSILDRE--IGLEVHASVGQGVELLNLLKTTRADVVL--TDIRMPGMDGLSLTRQICRSFPNTRVIALTMLDHEQDVKDLLDAGARGYLVKNVEKEELVQAIHYYLSRKFRPIYKNWKSQEPRQESVRLTRRERQVLELIAQGRTSQQIAESLKLSRFTIDTHRKNIHKKMGIRSNIGLLKAASKWLGQAPQDTDNR----
B1TR41               Two component transcriptio ---------TILLVDDHAIVREGYRALLQQQP--RLKVVAEAGDGAEAYRLFKQVKPD--LVIMDLTMPGLGGVEAVKRIRQWDPAARILVFTMHQNAAFAVQAIRAGAKGYVTKSSPPEALIRGAFDVLQGRIALSADIDHELALSRVTETLTPREFEILRLLLAEKSTEAIAAILGLSPKTVANTRYLIKAKLGVASDIELVLVALRQGILGAEGERHEIAP-
B4CVL8               Two component transcriptio -----METTKVLIADDHQVMRRGVRAVVELL--EGWEVCGEASTGREAVEMVEKLQPQIVV--MDVTMPELNGLEATRQIKKIAPATEILMFTGLETEELIRQVFEAGARSYILKTDGREQLEAALTALAAHKPYFFLHGKPKDEEQTVDGRLTDREREIVQLLAEGASNKEVADSLGISVKTVETHRAAIMKKLKFKSFSDLVRYAIRNHIIS-----------
ZP_02846382.1        two component transcriptio --------IRVFLVDDHPHGREGMREIIGA--DPEFMVVGEAASGEEAIARIDDVLPD--LVLMDINMPGMGGLEATQQLKYLYPSLKIVMVTVSDDITHLFEAIKRGAQGYLFKNLSPSAWREYLRAVVDDEAPMSSKPGHAGDASAMTTPLTAREKDILERVVTGESNKEIAVAFGLSEHTVKNHLKNILQKLHLDNRVQLTRYAYEQGMLE-----------
B5WKH1               Two component transcriptio ----MNTNYRVLVIEDHDLLRKGLCSMLSAQG--EFPVVGEAADGKQACQLAMTLNPD--LILMDLSMRGMNGIDATAAIKRRSPHVRVLALTVHQNEEYVREALRAGVDGYVLKDVSFDELIVAMRAVMQGKKHLSADVREAVAPKNAWDVLTARERSVLKLIAEGRTNRQVGEYLNLSPKTIEKYRASVMHKLAIENLTELVLVAISMGLLAERDPDTPVHP-
YP_001189662.1       two component LuxR family  ----MNEPIRLLLADDHEVTRAGFAAMLADCP--QFSIVGQAVDGRQALELCQRLNPDI--AILDIRMPQLNGLATARLLREQQPSIKVLLFTMYDSPDHLEAAVNAGAVGYLLKDASRQEVIDGLRQVAAGQCALNGMVSAQLLRRAPGSALTPREHQVLELIAAGFTNREIGEELGIATGTAKAHVERVIGKLGVADRTQAAVQGIALGLVAPQEHR------
YP_001544334.1       two component LuxR family  ---------KVLMVDDHPLFRQGVRWALSSE--RDIKIIGEGSSAEEGLVLISEHEPDVVL--TDLNLPNMDGLEFTRTIRRQYPNIGVVMLSVYESDEHAFNALRAGAAAYYSKEISPKTLATVLRRVARGEYVINDVMFEDPRVADRFSPLSDREIEVLEHIASGATNKDIADALKISTQTVKNHISSILRKLSLNDRTQAVLYALRRGWIETPAT-------
YP_297621.1          LuxR response regulator re --HSIDAPARVLLIDDHALVRDGMRMHLTLQPD--LYVVGEADGGEAALAWLERARERPDLVITDIGMRGMGGIALTAALHEQYPEIAVLVVSMHDNLEYARQAVRAGARGYVLKDAPADELMAAIEAVLAGRVFYSARIARQMPATGPLDALTRRERDILGCIGRGMANKEIATQLGVSVRTVETHRLNLKRKLGIEGRAGLVKYAVEQ---------------
B1WQK4               Two-component response reg --------MRILIVEDDPLMQLGLEQALSEHPN--FEIIGQAEDGYTGVQQALELKPD--LVVMDIGLPRLDGIAATKQIKEQEPNIHVVMLTSHTLQTEVVAALSSGADAYCIKGASLERLLAAIEAAQDGATYLDPQIAPNPEPNQNIALLSERELEVLKLIVEGKSNNEIAEDLYLSTNTIKTHVRGIMNKLAVDDRVQAAVVALRSGLV------------
YP_285549.1          two component LuxR family  -----MKKTRIILADDQLLIRAGIRAIVETLP--GFQIEAECTDGYEAISAIQRLQPDVVL--LDIAMPGPSGIEVARTIRQFDPNTKILVLSSVDRPEIIEQALAAGVNGYLLKDFVLAELLQHGERFLSPKIREMSRFSDAEGTSGSGTQLTARQTEILRLVASGRTTKEIARDLGISPKTVEFHRSRLMERIGVHDVTGLTRFALQTGVV------------
YP_676738.1          two component LuxR family  ----MMKKISIIIADDHTLIRDGIKSLLQSV--DEFEVVGEATDGDELIQFIDTLDPEIVV--LDITMPKKSGIEVITEVKKYNNRVKFIVLSMHDNPEYVLKSVQSGALSYLLKNTDHEEIIKAVKAVSAGQKYFSPDNPELVKASQIAETLTKRELEVLKEVSMGLSTKLIADKLFISVRTVETHRINLMKKLDVHNSAELIKKAMDLNII------------
YP_001266476.1       two component LuxR family  ---------KVLIVDDHPVIRLAVRMLMERHG---YDVVAETDNGVAALQLTRQHLPDIVV--LDIGIPKLDGLEVIARMATFSPGSKVLVLTSQAPGNFSMRCMQAGAAGYVCKQQELTELLSAIKAVLSGYSYFPNQALHASRETDMVNRLSAREMTVLQQLARGRSNKEIADSMYLSNKTVSTYKSRLLLKLNARSLVDLIELAQRQGL-------------
YP_001916925.1       two component transcriptio -----MSKIKVMIADDQTILADSLKTIIDLEDD--MEVVAVSSNGEETLEISEKLLPDIIL--MDIRMPKMDGVECTKKLKEKYPEIKIIILTTFDHDEYIVDALSYGASGYLLKDIDGDKLISSIRDDHKDEPLKSQDRKESQKEINLYEELTQREIEIAQLMVAGLSNKKIAEKLFITQGTVKNYITNIYSKLGVKERTSAVLYLQKLG--------------
YP_001510595.1       two component LuxR family  -------PVSVLLVDDEELVRVGLRVILESGG--EIDVVGEASDGSQVVPLIRENTPDV--VIMDIRMPRVDGLAAIREILADVADPPILVLTTFELDDYVYEALRSGANGFLLKRARPAEIVQAVRTIVSSESLLFPRPNREAHETMRRAVLTDREADVLRLISEGLSNNEIANRLYLGAQTVKSHVSSVLAKLGARDRTQAVIIAYESGFVE-----------
YP_823030.1          two component LuxR family  --TSSKPKIRIVVADDHPIFRDGLCRLLALE--EDFEVVAQAQDGRQVLDVLQQHEPDILL--LDLKMPGLDGLATLQRLQIAKNKTRVIVLTASDDKNEFVQAMKLGTSGIVLKQTATELLIKSIRKVHAGEPAMAAPSQAPPTRERERSPLSQREREIVALVAQGFKNKEMAEKMFISEQTVKNHLHNIFDKLGVSDRLELALYAIHNNL-------------
YP_002061678.1       DNA-binding response regul --------IRVLLIDDHTLFRSGVKLLLQRQPD--FEVVDEASDGVEGVKRAKQHQPDVIL--LDLNMPGLSGLETLQLLVQDVPSAHVVILTVSEDAEELTTALRDGACGFLVKNIDAETLVAGIRPVPAARPAPAAALAPAAHASVDPDQLTPREHDIVRALARGASNKEIAREFDVAESTVKIHVQNVLKKLNLSSRVQIAVYAVERGLTAPHPAE------
YP_893776.1          DNA-binding response regul MKEIAM-KYNVLIVDDHFVVREGLKLIIETS--DSFQIIGEAENGEEALSFIEKKKPDVIL--MDLNMPKMSGLETIEALNKKQNHTPIIILTTYNEDELMLKGIELGAKGYLLKDTDRENLFRTLEAAIRGEILLQPNIMEKIVNYKRKENLTEKELFVLKAIARGNKNKEIAFDMGIAERTVKAYLTNIYNKLGVNSRSEAVAVSIERKLI------------
YP_823724.1          two component LuxR family  ----------IVLVDDHKLVRDGVRMILER--GSEFLVVGEAENGADAVQLCKKSSPDIVL--MDIGLPGMNGIEATTELLRHCPSVKVIILSMYDDENSVVSAIRSGARAFVLKKASSNELLDALRTVARGGSYLSSQVSDRLHDRSPLESLSPRELQVLRLVAEGKTSKDIAVLLDLGLQTVRSYRKTMMKKLGVNNVAGLTQLALAAGI-------------
YP_298664.1          two component LuxR family  ---------TILIVDDHPAVRVVLKTHLSQV--LGVTHVLEADNGQAAVEIVRQYAPDVVILDLDI--PRINGLDVIPRLKAIQPGVRILVISGQDQNTFAPRARQAGANGYVSKTQELPEIVRCVESVLAGYSVMPDGRADGVDETRRLGSLSDKELVIMQMLAKGMSNKQIGEVLFISNKTVSTHKTRIMEKLGARSLVDVIDFARRHHI-------------
YP_001433820.1       two component LuxR family  ------RAIRVVLADDHELVLEGLRGLLERESD--MIVVATATDGESLLAIIERERPDVVV--MDLAMPTRDGLSCLREIRRRGMPVKVVILTAFGDGGALQSAWEMQADGFALKTDPPRQTIATIRNVAHGQIVFPRVVRQAADATQAHARLTQRERDVLRLLAEGMPNAQIAERLVVQESTVKYHLQNIFQKLGVTNRTEAAQVYYREGGER-----------
YP_087470.1          CitB protein [Mannheimia s ----MSEKTKVIVIDDHPLMRRGIKQLIELE--EQFEVVGDAGSGNEGVELAIKTSPD--LIILDLNMKGLSGLDTLKVLRQEGVDARIVILTVSDSKADIYALIDAGADGYLLKDTEPDTLLAQIKQIAQGEIILSDSIKNRHPAHEPIHALTDREMDVLQLIATGLSNKQIAAQLFISEETVKVHIRNLLRKLNVHSRVAATVLYLE----------------
YP_188953.1          LuxR family DNA-binding re ---------KVILVDDHYIVRQGLEFLLSTVDDLSV-LKGFKDGATFLSYLKNNERPDIVL--LDLVMPEMNGIEITEILKQQYPEIKVLVLTSYVDDEHVISAIDKGADGYEMKDVEPQKLIETIHKVLQGERIIHPQAKSVIKAVSKKPKLSKREKEVLKEMVKGKTNKEIARALFVSEKTVKTHVSHIFSKLEVSDRTQAAIYAMENKLI------------
NP_959623.1          NarL_1 [Mycobacterium aviu MADPATRTVRVVVADDHPLFREGVVRALVSSGA--VNVVGEAEDGSAALELIKSHQPDVAL--LDYRMPGMDGAQVAAAVRADGLATRVLLISAHDESAIVYQALQQGAAGFVLKDSTRSEIVKAVLDCAQGRDVVAPALEIRQRAEPTGPVLSAREREVLHRIARGQSIPAIAGELYVAPSTVKTHVQRLYEKLGVSDRAAAVAEAMRQGLLS-----------
NP_865127.1          nitrate/nitrite regulatory --------KRLLIVDDHEVSRLGTLAALE---GTGIEVVAQADKAADALEIVSNTP--LDTVLLDIRMEGGDGLNTLGRIKLDHPDLPILLFSGYDNPTYVARAVALGACGYILKTAPVSRLIEALNLAFDGQQSWTREELRRRMNQDIDVPLTQRESEVLRQMALGLTNKEIAKMLGISYETVKEHVQHILRKLGVSDRTQAAVWAVRKNLV------------
YP_677878.1          two-component response reg -----TKKIKVFIADDHEIFRDGVRQLISNESD--MEVVGTASSGEEALELLKDNHADV--VIMDIRMSGMNGLETSRAILKNDSNTHILFFSLYDRDDYVVTALEMGASGYILKDTSNKIFLKGIRAVSNGQFYFDVKNTPEISSSSIQSSLSKREYQILNRIREGKTNKEIAEEYNLSVRTVETHRMNILRKFNVSNFDELIK--------------------
YP_516573.1          hypothetical protein DSY03 -------PIRILIGDDHAIVRSGLTMLINS--HDDMEVVGTAADGRETFELAMKLKPDVIL--LDLSMPGENGLSATLRIKDAAPEIQILILTMHDDEEYIFKILQAGASGYILKSAYDNDLINAIRTIYHGNAYIHEFAQRSLHGNESGTDLTVREQNFLSLMAMGYSNKEIAEELSVSVKTVESYRSKIKDKLNLKTRHELVRYALKKGLMD-----------

Pairwise Alignments

NP_294711.1   DNA-binding response regulator [Deinococcus radiodurans R1]
Length: 239. Score: 495. Identity: 17%. E-value: 4E-48.
Query:      2 EHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF--------LSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHC
Sbjct:     19 ENEAARPITLLLVDDHPVVRKGTRELLE--GETDLRVVGEAGSGEEALAQARSLTPDVIL--MDVSMPGMNGIEATKAIKAEQPSVGVLVLTSYDDDAYVFALLEAGAAGYLLKNASEDDLLGAVRAVAAGESALHPSIARKVLERFSVASTPTPPEDDLSPRELEVLRVAASGRTNKEIARDLDISPRTVQVHLANIFSKLGVGSRTEAVLHGIKRGWIDPR

B5GEB8   Two-component system response regulator - Streptomyces sp. SPB74
Length: 257. Score: 471. Identity: 16%. E-value: 2E-45.
Query:      9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELA--IKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQ-------------WYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETSNVLHP
Sbjct:      3 IRVLLVDDQPLLRTGFRMILEAEPD--VAVVGEAGDGAQALDQVRALQPDVVL--MDIRMPRMDGVEATRQITGPERDGPVKVLVLTTFDLDEYVVEALRAGASGFLLKDAPAHELVQAIRVVASGEAMLAPSVTRRLLDKYAGHLPSGEEQQPSSLQTLTEREVEVLKLVARGLSNAEIAADLFVSETTVKTHVGHVLTKLGLRDRVHAAVYAYESGLVSPCCTEPPGSP

YP_002316936.1   DNA-binding response regulator, NarL family (REC-HTH domains) [Anoxybacillus flavithermus WK1]
Length: 260. Score: 468. Identity: 15%. E-value: 6E-45.
Query:      2 EHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYI--------------------NQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR
Sbjct:     30 ERGTTMKTRIVLIDDHKLFREGIKRILDFE--QDFEVVAEGSDGDEALALVERYKPDV--VIMDINMPHVNGVEATRQLIEAYPDTKVIILSIHDDESYVMHALQTGAMGYLLKEMDADALIEAVRVVAEGGSYLHPKVTHNLVKEYRRLVAGEGGGKEKQNQDVCRPYHLLTRRECEVLQLLADGKSNKGIADALYISEKTVKNHVSNILQKLNVNDRTQAVVVAIKNGWVE

B4C6V0   Two component transcriptional regulator, LuxR family - Cyanothece sp. PCC 7425
Length: 247. Score: 462. Identity: 15%. E-value: 3E-44.
Query:      8 KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLC
Sbjct:     44 NIRVLIVDDHPVVRSGLAMIIQ--YAKGIETVGEASTGAEAVALFCQHRPDVVL--MDLKMPEMGGVEATQAILQECPNAYIIVLTTYDGDEDIYRGLQAGARGYLLKSVSREELIDGIKQVYAGRKYIPAEVGARLAERMSSPQLTERERQVLMLMCEGKSNQEIALTLQISEGTIKFHVNGILRKLDVCDRTQAVLVALKRGM

YP_612871.1   two component LuxR family transcriptional regulator [Silicibacter sp. TM1040]
Length: 233. Score: 455. Identity: 21%. E-value: 2E-43.
Query:      8 KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQSRT--LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM
Sbjct:     23 PIRVLIVDDHPMVAEGIQSILESYGD--IEVVGAVSSGREAIARAEALVPDVIL--MDLNMPDVGGLSATEIIQERCPEIRVLILSMHDSPEYITTALSHGAVGYVLKDVQPEEIKTAIDAVMRGEQYLCTGAAGSLSPQSQTSREALTGREQTILLELAQGKSNKEVAQALDISVRTVETHRKNIKRKLGISSTAGLTRYALEHGVL

ZP_03492542.1   two component transcriptional regulator, LuxR family [Alicyclobacillus acidocaldarius LAA1]
Length: 224. Score: 445. Identity: 15%. E-value: 2E-42.
Query:      6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE-RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQW-----YINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHC
Sbjct:      1 MAHTRVVIVDDHALVRQGLRLIL--HGVAGIEVVGECSCGEDALKAAVKDRPDV--MLMDVHMPQGLDGITTARHLRQIAPQVRVIMLTMFDDRAHVEKMLDAGVSGIVFKHDDSSEIVAAIQHGQPGRPYLSRRWGQRANAETVSPSRTAERLSPRETEVLVLLAQGYTNREVADALHISVKTVETHRQHIMRRIGLHSRAALVRYAYQNGLVDPP

B3KFB6   Response regulator receiver - Geobacillus sp. Y412MC10
Length: 601. Score: 447. Identity: 14%. E-value: 2E-42.
Query:      9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQSRT---------------LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR
Sbjct:    385 IRLLVVDDHPVIRESLRTLLEEQ--QDFQVVGTAEDGEQAIELCRQVRPQ--LVLMDVEMPNLDGISASRTIKESWPHIRILILTTFEDTKQALEAMRSGVDGYLLKSMQPLELAETIRTVHRGGTLIDQGMSHKLFAQLEADNSRDDPSSIKASSAYDLTPRELEILQFVSEGLRYKSIASKLYLSDGTVRNYASSVYMKLGVRNREEAVQKAREAGLLE

YP_873518.1   two component LuxR family transcriptional regulator [Acidothermus cellulolyticus 11B]
Length: 303. Score: 444. Identity: 16%. E-value: 3E-42.
Query:      8 KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLN-------------NQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR
Sbjct:     86 PIKVLVADDHALFRRGLEMVLRQEPD--IQLVAEASDGAEAVARAAETLPDVVL--LDVRMPKRTGIEACAAIKEVCPSAKIIMLTISDEEADLYEAIKAGAMGYLLKEISIDEVAAAIRAVHGGQSLISPSMASKLLNEFASLIKRGDARHQVPAPKLTEREMEVLRLVAKGLNNRDIAKQLFISENTVKNHVRNILEKLQLHSRMEAVVYAVREKLLE

B2EMF7   Two component transcriptional regulator, LuxR family - bacterium Ellin514
Length: 267. Score: 443. Identity: 15%. E-value: 4E-42.
Query:      3 HSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQSR-----------TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETSNVLHP
Sbjct:     25 HKSMPNIRVLLADDHTVVRQGLRALLS--GEKDIQIVGEAGTGREAVQMAQKLTPDVIL--MDIAMPLMNGLEATRKIAEVAPSAKVLVLSSYGEDDYVQKLTEAGASGYLIKHAAANDLVAAVRETHKGNAFFSPGIAKRLRDQVRAGFANGNGTKASFELTERELETLGHIVAGKPNKVIACDMGISIKTVEKHRQQVMNKLNIHEVASLTRYAIAKGMIDANGQSLMPNP

NP_630267.1   two-component system response regulator [Streptomyces coelicolor A3(2)]
Length: 260. Score: 442. Identity: 19%. E-value: 6E-42.
Query:      3 HSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATD----------RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH
Sbjct:     42 ASAPSKIRILLADDHALVRRGVRLILDREPD--LEVVAEAGDGAEAIDMARAHEAD--LAVLDIAMPRLTGLQAARELAALKPGLRILMLTMHDNEQYLFQALKSGACGYVLKSVADRDLVAACRAAMRDEPFLYPGAVTALIRNYLDRVRHGEETSDHILTPREEEVLKLVAEGHSSKEIAEILFISIKTVQRHRANLLQKLGLRDRLELTRYAIRAGLIEP

B3KB69   Response regulator receiver - Geobacillus sp. Y412MC10
Length: 234. Score: 435. Identity: 13%. E-value: 4E-41.
Query:      6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSR--ISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWY-------INQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM
Sbjct:     18 MGTIRILLADDHDMVRMGLKTYLSL--DPGFEVIGEAANGQEVVDMLRNGEEADRPDLILMDLMMPVMNGAETTRAVMSEFPDQKIVILTSFLEDELVVECIEAGAVSYVLKTVSADELIYALQGAFRGMPVMTKDVSEALTRGIRRHMVNGDESGLTEREKEVLLLIAEGKSNKEIGEELHISIKTVKTHVSNLLMKCELEDRTQLAIYAHRKGWV

YP_677929.1   response regulator [Cytophaga hutchinsonii ATCC 33406]
Length: 220. Score: 433. Identity: 16%. E-value: 7E-41.
Query:      6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQA----------------TDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAAD
Sbjct:      1 MKKINILLVDDHTIVRDGIKATLKDQ--KNFHIVGEAANGLDGIEAVKQLKPDV--VIMDITMPEMSGIEAADVISKKYPDSKVLILSMHDNETYILKSVEAGAYGYLLKDVDKDEFIKAITAVYNGDKYFNTAISSVLVSGYLSKVKQTDSIQSGYSNDEYELTKREKGILKMITDGKNNREIADGLGISIRTIETHRANIMKKLKVKNAVELVRIAI

YP_181778.1   LuxR family DNA-binding response regulator [Dehalococcoides ethenogenes 195]
Length: 232. Score: 430. Identity: 15%. E-value: 1E-40.
Query:      9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYI-----------NQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCE
Sbjct:      2 ISIVLADDHQIVRHGLKALLEAEAD--FEVVGEASDGIEAVNLVESLQPGV--LVTDLMMGGMSGIEVTYQVVKRSPKTAVVILSMYGNEAYVHEALRAGARAYVLKDSTSEELVRSVREAVQGHRYLSSPLSEKAIEAYMEKSAEATSLDPYETLTIREREVLHLVAQGHTCAEIAERLFISPRTVEVHRANMMRKLDLRNQTQLLRYALQRGIIPPEN

YP_002367934.1   Two-component protein Kinase [Bacillus cereus B4264]
Length: 595. Score: 427. Identity: 14%. E-value: 3E-40.
Query:      9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNN-----------QWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR
Sbjct:    383 IRLLIVDDQPFVRESLRTLLDR--YEDLNVVGLAEDGNEAIDLCGRLQPHVIL--MDLDMQHMDGVEATKKIKQQWPHIRILIFTTFQDTEQALESLRNGADGFLLKSIETLELANTIRLIHKGGTLIDQGMSHKIFEKFDAQKETPQSKATAYELTAREIEILQLVAKGLRYTTIASRLYLSNGTVRNYASTAYTKLGVRNKEEAVQKALEIGIIE

YP_356401.1   two component signal transduction response regulator [Pelobacter carbinolicus DSM 2380]
Length: 223. Score: 428. Identity: 13%. E-value: 3E-40.
Query:      4 SRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQAT---------------DRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR
Sbjct:      2 PKSPPFKVFLADDHPLLRTGLRMSLSRFADIDF--IGEASDGFKAVEKIKQNPPDVALI--DVDMPGLSGIAAVRMLRKQYPDMTLLILSSYSDKHFIEEAMQAGADGYVLKSIDINELADLIRAFSCGEHPMSPYLMDLAVDWHASEQEEESPADKDDESDAFLTRREQQILSCLAQGQGNKEISNALFISTETVKTHIKNIFKKLEVKSRLEAVIAAKEKKLID

XP_001786429.1   predicted protein [Physcomitrella patens subsp. patens]
Length: 563. Score: 427. Identity: 13%. E-value: 4E-40.
Query:      9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQSRT---------------LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGL
Sbjct:    358 IRLLVVDDHPVIRESLRTLLEEQ--QDFQVVGTAEDGEQAIELCRQLRPQ--LVLMDVDMPIVDGISASRTIKESWPHIRILILTTFEDTKQALEALRSGVDGYLLKSMQPLELAETIRTVHRGGTLIEQGMSHKLFAQLEADNSGDDPSSIKASSAYDLTPRELEILQFVSKGLRYKSIASNFYLSDGTVRNYASSAYLKLGVRNREEA

B5GTH3   Two component transcriptional regulator - Streptomyces clavuligerus ATCC 27064
Length: 723. Score: 421. Identity: 17%. E-value: 1E-39.
Query:      4 SRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDR----------LNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHC
Sbjct:    500 TRTGPVTVLIADDQPLVRQGIGLIVRAAP--EFRVVGEVDDGEQAVAAAHRLRPDVVL--MDIRMPVLDGVAATERLTAELPGCRVLALSTFDMDEHVVRALRAGASGFLPKDVSPEELTAALRTVSAGDAVVAPRLLTRLIGTFVAPQRTTEEVRLDGLTPRETEVLRLIATGLDNTGIAEELGIGVQTVKNHITSVFAKLGLRDRAQAVISAYESGLVSPR

B2EVT4   Two component transcriptional regulator, LuxR family - bacterium Ellin514
Length: 241. Score: 423. Identity: 13%. E-value: 1E-39.
Query:      7 KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWY-------INQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR
Sbjct:     31 SPLRILIVDDHAIIRQGLKQILA--GEFGLGVFGEANNGTEALEQIWKQSWDVVL--LDITMPGKSGLDVLKQIVEAQPNMAVLVLSMHPEDQYAVRVLKTGAAGYITKNTASEEVVNAVKKVLAGGKYVSASLAENLATSLNTPMGKAPHEILSDREYQVMRLIALGKSVKEIAFDLSLSVKTISTYRTRIMEKMKFKTNADIIRYAVHERLVD

ZP_02425159.1   hypothetical protein ALIPUT_01296 [Alistipes putredinis DSM 17216]
Length: 216. Score: 420. Identity: 16%. E-value: 2E-39.
Query:     10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYI---------NQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR
Sbjct:      5 RIILVDDHSLFRSGMRGLLDR--YDGIRVVGEASTGEEFLAMLPATEADV--VFMDFAMPGMNGAETTEKALALEPGLKVITLSMFGDENYYSRMVQAGAKGFLMKDSPMDEVLRAIETVAAGGTYFCEEVLRSLASRMQTAVSGYEGSDERLSTREIEILVCVCRGLSNQEIADELFISKRTVDKHRANILEKTGCKNTASLVVYAVRHGLVD

ZP_03394528.1   regulatory protein, LuxR:Response regulator receiver [Corynebacterium amycolatum SK46]
Length: 217. Score: 420. Identity: 15%. E-value: 2E-39.
Query:      6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQSR-----TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETS
Sbjct:      1 MSDIKVLIVDDDPLVLSTLRTYFKKAPH--ITVVDEASDGHEALNIIA--RGGVDVVLTDIHMPNMDGVELLERIKKVENPPKFIAITSFDTDETMLKILSLGGNGYILKTARPESVIGTIEDVFQGGTVISPISATRLIKTLPSRNISSYKITQAEREVLGLICRGKSNHDIAKELGKSPGTIKKHLSSMFNKFGATSRLDLALKAIDAGFQPPASAA

ZP_02928767.1   two-component system regulatory protein [Verrucomicrobium spinosum DSM 4136]
Length: 239. Score: 419. Identity: 15%. E-value: 3E-39.
Query:      5 RIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHC
Sbjct:      1 MTSPLTLLIVDDHFVVRSGLVAALEIEDD--IDIIGEAKRGDQALEAYQRLRPSVVL--MDLQLPGLSGVQATAAICAHDPEARILVFSTFSHEDEILSALNAGAAGYVQKSSTREELLDALRRVAAGGTSLPPDLAQRLESQRIRLTVTPREREVLELIASGQSNKRIAAAIGITEDTVKRHVTHILEKLGVNDRAQATAEAIRRGIIRPP

YP_084610.1   response regulator [Bacillus cereus E33L]
Length: 597. Score: 418. Identity: 13%. E-value: 4E-39.
Query:      9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE----------------LFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAAD
Sbjct:    381 IRLLVVDDQALITNSLEQILENQ--TDFIVAGKAYDGSEALILCEQLEPDIVL--MDIQMPEMNGIEALLEMKRRWPNMKIVLMTTFEDSLQAATALEHGAEGYMLKSIHPQEMKEALKLIYNGGTWIDQSVATRIFEEMKLQREQLAKIKSTKQTFPYGLTKREMEILEHLSNGLRYKSIAAKLFLSEGTIRNYCSNLYSKLGVSNREEAIKMAR

B1XRB7   Response regulator receiver, LuxR domain - Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6)
Length: 231. Score: 418. Identity: 12%. E-value: 4E-39.
Query:      5 RIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQA-------------TDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM
Sbjct:      1 MTSPLKVLLIEDDELFRLGLATRLQQE--ALLEITAEAEDGETALDLI--TKQEFDIIILDVGLPGIGGVETCRQIKQQQPQLPILVLTSHSQPTLINRLIEAQAQGYCLKGVDAESLILAIQSIAAGASWWDAQATQQIRAQFQQPMAEMPRSVPAQDNPLTQREGEILALIANGKSNSEIAETLYIAASTVRVHVHAILQKLEARDRTQAVVIALRHGLI

YP_001618769.1   DNA-binding response regulator [Sorangium cellulosum 'So ce 56']
Length: 233. Score: 413. Identity: 17%. E-value: 1E-38.
Query:      1 MEHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQ---------SRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR
Sbjct:     14 MAETPASKLHIYLIDDHPVVREGFARALSDEPD--MVVVGQAGTAADALRETASCKPDVVLV--DLNIPDRDGIELLGALRAQLPQAKLLVLSGYDDEFRVAEALRAGAQGYLVKTSKLEEVIEGIRRIATGGAPLSSSIAGAVVRAMRKPASEGSGGLDALTPRERQVLRLLAAGVSTRETAARLTISPKTVETHRVRIYAKLGCKSAVELTRIAVRTGLIE

ZP_01121787.1   Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Robiginitalea biformata HTCC2501]
Length: 217. Score: 413. Identity: 22%. E-value: 2E-38.
Query:      9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL------FLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETSNV
Sbjct:      2 IRIALVDDHRLFLEGIRSILDRE--IGLEVHASVGQGVELLNLLKTTRADVVL--TDIRMPGMDGLSLTRQICRSFPNTRVIALTMLDHEQDVKDLLDAGARGYLVKNVEKEELVQAIHTVARGDYYLSRKFRPIYKNWKSQEPRQESVRLTRRERQVLELIAQGRTSQQIAESLKLSRFTIDTHRKNIHKKMGIRSNIGLLKAASKWLGQAPQDTDNR

B1TR41   Two component transcriptional regulator, LuxR family - Methylocella silvestris BL2
Length: 223. Score: 411. Identity: 15%. E-value: 2E-38.
Query:     10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQSRT------LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETSNVLHP
Sbjct:      6 TILLVDDHAIVREGYRALLQQQP--RLKVVAEAGDGAEAYRLFKQVKPD--LVIMDLTMPGLGGVEAVKRIRQWDPAARILVFTMHQNAAFAVQAIRAGAKGYVTKSSPPEALIRGAFDVLQGRIALSADIDHELALSRVTETPTATDVLTPREFEILRLLLAEKSTEAIAAILGLSPKTVANTRYLIKAKLGVASDIELVLVALRQGILGAEGERHEIAP

B4CVL8   Two component transcriptional regulator, LuxR family - Chthoniobacter flavus Ellin428
Length: 217. Score: 412. Identity: 13%. E-value: 2E-38.
Query:      6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQ-----------ATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR
Sbjct:      1 METTKVLIADDHQVMRRGVRAVVELL--EGWEVCGEASTGREAVEMVEKLQPQIVV--MDVTMPELNGLEATRQIKKIAPATEILMFTGLETEELIRQVFEAGARSYILKTDGREQLEAALTALAAHKPYFTTQVGEILFAKFLHGKPKDEEQTVDGRLTDREREIVQLLAEGASNKEVADSLGISVKTVETHRAAIMKKLKFKSFSDLVRYAIRNHIIS

ZP_02846382.1   two component transcriptional regulator, LuxR family [Paenibacillus sp. JDR-2]
Length: 235. Score: 411. Identity: 11%. E-value: 2E-38.
Query:      9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQA-------------------------TDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR
Sbjct:      8 IRVFLVDDHPHGREGMREIIGA--DPEFMVVGEAASGEEAIARIDDVLPD--LVLMDINMPGMGGLEATQQLKYLYPSLKIVMVTVSDDITHLFEAIKRGAQGYLFKNLSPSAWREYLRAVVDDEAPMSKEIAFRLLQEFTSAASNGIKPAKTGSKPGHAGDASAMTTPLTAREKDILERVVTGESNKEIAVAFGLSEHTVKNHLKNILQKLHLDNRVQLTRYAYEQGMLE

B5WKH1   Two component transcriptional regulator, LuxR family - Burkholderia sp. H160
Length: 262. Score: 409. Identity: 15%. E-value: 4E-38.
Query:      5 RIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDR-----------LNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM-------RHCETSNVLHP
Sbjct:      1 MNTNYRVLVIEDHDLLRKGLCSMLSAQG--EFPVVGEAADGKQACQLAMTLNPD--LILMDLSMRGMNGIDATAAIKRRSPHVRVLALTVHQNEEYVREALRAGVDGYVLKDVSFDELIVAMRAVMQGKKHLSADVYGYMVDSFITGREAVAPKNAWDVLTARERSVLKLIAEGRTNRQVGEYLNLSPKTIEKYRASVMHKLAIENLTELVLVAISMGLLTSLATKCAERDPDTPVHP

YP_001189662.1   two component LuxR family transcriptional regulator [Pseudomonas mendocina ymp]
Length: 220. Score: 409. Identity: 14%. E-value: 4E-38.
Query:      5 RIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYI--------NQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETS
Sbjct:      1 MNEPIRLLLADDHEVTRAGFAAMLADCP--QFSIVGQAVDGRQALELCQRLNPDI--AILDIRMPQLNGLATARLLREQQPSIKVLLFTMYDSPDHLEAAVNAGAVGYLLKDASRQEVIDGLRQVAAGQCALNGMVSAQLLRRVVQRNQGGAPGSALTPREHQVLELIAAGFTNREIGEELGIATGTAKAHVERVIGKLGVADRTQAAVQGIALGLVAPQEHR

YP_001544334.1   two component LuxR family transcriptional regulator [Herpetosiphon aurantiacus ATCC 23779]
Length: 257. Score: 409. Identity: 11%. E-value: 4E-38.
Query:     10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQ----------------------SRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCET
Sbjct:      6 KVLMVDDHPLFRQGVRWALSSE--RDIKIIGEGSSAEEGLVLISEHEPDVVL--TDLNLPNMDGLEFTRTIRRQYPNIGVVMLSVYESDEHAFNALRAGAAAYYSKEISPKTLATVLRRVARGEYVINDVMFEDPRVADRILTQFRGLQTGIVAEPDLDISLFSPLSDREIEVLEHIASGATNKDIADALKISTQTVKNHISSILRKLSLNDRTQAVLYALRRGWIETPAT

YP_297621.1   LuxR response regulator receiver [Ralstonia eutropha JMP134]
Length: 231. Score: 408. Identity: 18%. E-value: 5E-38.
Query:      3 HSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRI--SFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLN----NQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADIL
Sbjct:     13 HSIDAPARVLLIDDHALVRDGMRMHLTLQPD--LYVVGEADGGEAALAWLERAGARERPDLVITDIGMRGMGGIALTAALHEQYPEIAVLVVSMHDNLEYARQAVRAGARGYVLKDAPADELMAAIEAVLAGRVFYSARIARGMAEQMPATGPLDALTRRERDILGCIGRGMANKEIATQLGVSVRTVETHRLNLKRKLGIEGRAGLVKYAVEQ

B1WQK4   Two-component response regulator - Cyanothece (strain ATCC 51142)
Length: 247. Score: 408. Identity: 14%. E-value: 6E-38.
Query:      9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRL---------NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM
Sbjct:     38 MRILIVEDDPLMQLGLEQALSEHPN--FEIIGQAEDGYTGVQQALELKPD--LVVMDIGLPRLDGIAATKQIKEQEPNIHVVMLTSHTLQTEVVAALSSGADAYCIKGASLERLLAAIEAAQDGATYLDPQIARLVLDNLKSPNPEPNQNIALLSERELEVLKLIVEGKSNNEIAEDLYLSTNTIKTHVRGIMNKLAVDDRVQAAVVALRSGLV

YP_285549.1   two component LuxR family transcriptional regulator [Dechloromonas aromatica RCB]
Length: 211. Score: 406. Identity: 15%. E-value: 8E-38.
Query:      6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH------QELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM
Sbjct:      1 MKKTRIILADDQLLIRAGIRAIVETLP--GFQIEAECTDGYEAISAIQRLQPDVVL--LDIAMPGPSGIEVARTIRQFDPNTKILVLSSVDRPEIIEQALAAGVNGYLLKDFVLAELLQALEMVLHGERFLSPKIREMSRFSDAEGTSGSGTQLTARQTEILRLVASGRTTKEIARDLGISPKTVEFHRSRLMERIGVHDVTGLTRFALQTGVV

YP_676738.1   two component LuxR family transcriptional regulator [Cytophaga hutchinsonii ATCC 33406]
Length: 215. Score: 406. Identity: 18%. E-value: 9E-38.
Query:      5 RIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATD----------RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM
Sbjct:      1 MMKKISIIIADDHTLIRDGIKSLLQSV--DEFEVVGEATDGDELIQFIDTLDPEIVV--LDITMPKKSGIEVITEVKKYNNRVKFIVLSMHDNPEYVLKSVQSGALSYLLKNTDHEEIIKAVKAVSAGQKYFSPDIYSIILNGLANPELVKASQIAETLTKRELEVLKEVSMGLSTKLIADKLFISVRTVETHRINLMKKLDVHNSAELIKKAMDLNII

YP_001266476.1   two component LuxR family transcriptional regulator [Pseudomonas putida F1]
Length: 236. Score: 406. Identity: 15%. E-value: 9E-38.
Query:     10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQW------YINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLC
Sbjct:     32 KVLIVDDHPVIRLAVRMLMERHG---YDVVAETDNGVAALQLTRQHLPDIVV--LDIGIPKLDGLEVIARMATFSPGSKVLVLTSQAPGNFSMRCMQAGAAGYVCKQQELTELLSAIKAVLSGYSYFPNQALHASRGRGAGSETDMVNRLSAREMTVLQQLARGRSNKEIADSMYLSNKTVSTYKSRLLLKLNARSLVDLIELAQRQGL

YP_001916925.1   two component transcriptional regulator, LuxR family [Natranaerobius thermophilus JW/NM-WN-LF]
Length: 232. Score: 405. Identity: 16%. E-value: 1E-37.
Query:      6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF-----------------------------LSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILL
Sbjct:      1 MSKIKVMIADDQTILADSLKTIIDLEDD--MEVVAVSSNGEETLEISEKLLPDIIL--MDIRMPKMDGVECTKKLKEKYPEIKIIILTTFDHDEYIVDALSYGASGYLLKDIDGDKLISSIRDAYNDKLLIPTSIAAKLIGKIDNRKQQPTDDHKDEPLKSQDRKESQKEINLYEELTQREIEIAQLMVAGLSNKKIAEKLFITQGTVKNYITNIYSKLGVKERTSAVLYLQKLG

YP_001510595.1   two component LuxR family transcriptional regulator [Frankia sp. EAN1pec]
Length: 244. Score: 405. Identity: 16%. E-value: 1E-37.
Query:      8 KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTR-RLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQAT---------DRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR
Sbjct:     28 PVSVLLVDDEELVRVGLRVILESGG--EIDVVGEASDGSQVVPLIRENTPDV--VIMDIRMPRVDGLAAIREILADVADPPKILVLTTFELDDYVYEALRSGANGFLLKRARPAEIVQAVRTIVSSESLLFPEAIRYMAGKRPNREAHETMRRAVLTDREADVLRLISEGLSNNEIANRLYLGAQTVKSHVSSVLAKLGARDRTQAVIIAYESGFVE

YP_823030.1   two component LuxR family transcriptional regulator [Solibacter usitatus Ellin6076]
Length: 247. Score: 405. Identity: 15%. E-value: 1E-37.
Query:      3 HSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNG---------------------VRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLC
Sbjct:     17 TSSKPKIRIVVADDHPIFRDGLCRLLALE--EDFEVVAQAQDGRQVLDVLQQHEPDILL--LDLKMPGLDGLATLQRLQIAKNKTRVIVLTASDDKNEFVQAMKLGTSGIVLKQTATELLIKSIRKVHAGEIWLDSHTTAAVIRQFVANDETPAMAAPSQAPPTRERERSPLSQREREIVALVAQGFKNKEMAEKMFISEQTVKNHLHNIFDKLGVSDRLELALYAIHNNL

YP_002061678.1   DNA-binding response regulator NarL [Burkholderia mallei JHU]
Length: 246. Score: 404. Identity: 14%. E-value: 1E-37.
Query:      9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL-----------------------FLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETS
Sbjct:     16 IRVLLIDDHTLFRSGVKLLLQRQPD--FEVVDEASDGVEGVKRAKQHQPDVIL--LDLNMPGLSGLETLQLLVQDVPSAHVVILTVSEDAEELTTALRDGACGFLVKNIDAETLVAGIRKAAAGEPVIAESMTAKWIASLRAPVPAARPAPAAALAPAAHASVDPDQLTPREHDIVRALARGASNKEIAREFDVAESTVKIHVQNVLKKLNLSSRVQIAVYAVERGLTAPHPAE

YP_893776.1   DNA-binding response regulator [Bacillus thuringiensis str. Al Hakam]
Length: 219. Score: 406. Identity: 13%. E-value: 1E-37.
Query:      1 MEHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQSR---------TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM
Sbjct:      1 MKEIAM-KYNVLIVDDHFVVREGLKLIIETS--DSFQIIGEAENGEEALSFIEKKKPDVIL--MDLNMPKMSGLETIEALNKKQNHTPIIILTTYNEDELMLKGIELGAKGYLLKDTDRENLFRTLEAAIRGEILLQPNIMEKIVNYKRKEVYADKVEENNLTEKELFVLKAIARGNKNKEIAFDMGIAERTVKAYLTNIYNKLGVNSRSEAVAVSIERKLI

YP_823724.1   two component LuxR family transcriptional regulator [Solibacter usitatus Ellin6076]
Length: 225. Score: 403. Identity: 18%. E-value: 2E-37.
Query:     11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQ-----------WYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLC
Sbjct:      5 IVLVDDHKLVRDGVRMILER--GSEFLVVGEAENGADAVQLCKKSSPDIVL--MDIGLPGMNGIEATTELLRHCPSVKVIILSMYDDENSVVSAIRSGARAFVLKKASSNELLDALRTVARGGSYLSSQVSDRLLQRIQRGDLETHDRSPLESLSPRELQVLRLVAEGKTSKDIAVLLDLGLQTVRSYRKTMMKKLGVNNVAGLTQLALAAGI

YP_298664.1   two component LuxR family transcriptional regulator [Ralstonia eutropha JMP134]
Length: 232. Score: 403. Identity: 17%. E-value: 2E-37.
Query:     10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQAT---DRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLC
Sbjct:     28 TILIVDDHPAVRVVLKTHLSQV--LGVTHVLEADNGQAAVEIVRQYAPDVVILDLDI--PRINGLDVIPRLKAIQPGVRILVISGQDQNTFAPRARQAGANGYVSKTQELPEIVRCVESVLAGYSVMPDVDGGRADGVDETRRLGSLSDKELVIMQMLAKGMSNKQIGEVLFISNKTVSTHKTRIMEKLGARSLVDVIDFARRHHI

YP_001433820.1   two component LuxR family transcriptional regulator [Roseiflexus castenholzii DSM 13941]
Length: 221. Score: 404. Identity: 15%. E-value: 2E-37.
Query:      7 KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQS-----RTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR
Sbjct:      6 RAIRVVLADDHELVLEGLRGLLERESD--MIVVATATDGESLLAIIERERPDVVV--MDLAMPTRDGLSCLREIRRRGMPVKVVILTAFGDGGALQSAWEMQADGFALKTDPPRQTIATIRNVAHGQIVFPRVVRQAADATQAHGQSLLARLTQRERDVLRLLAEGMPNAQIAERLVVQESTVKYHLQNIFQKLGVTNRTEAAQVYYREGGER

YP_087470.1   CitB protein [Mannheimia succiniciproducens MBEL55E]
Length: 226. Score: 401. Identity: 15%. E-value: 3E-37.
Query:      5 RIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLN----NQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADI
Sbjct:     18 MSEKTKVIVIDDHPLMRRGIKQLIELE--EQFEVVGDAGSGNEGVELAIKTSPD--LIILDLNMKGLSGLDTLKVLRQEGVDARIVILTVSDSKADIYALIDAGADGYLLKDTEPDTLLAQIKQIAQGEIILSDSIKNLLVERHPAHEPIHALTDREMDVLQLIATGLSNKQIAAQLFISEETVKVHIRNLLRKLNVHSRVAATVLYLE

YP_188953.1   LuxR family DNA-binding response regulator [Staphylococcus epidermidis RP62A]
Length: 207. Score: 401. Identity: 15%. E-value: 4E-37.
Query:     10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQSR----TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM
Sbjct:      3 KVILVDDHYIVRQGLEFLLSTVDDLSV-LKGFKDGATFLSYLKNNERPDIVL--LDLVMPEMNGIEITEILKQQYPEIKVLVLTSYVDDEHVISAIDKGADGYEMKDVEPQKLIETIHKVLQGERIIHPQAKSVIKAVSKKPHYTNKLSKREKEVLKEMVKGKTNKEIARALFVSEKTVKTHVSHIFSKLEVSDRTQAAIYAMENKLI

NP_959623.1   NarL_1 [Mycobacterium avium subsp. paratuberculosis K-10]
Length: 217. Score: 399. Identity: 19%. E-value: 5E-37.
Query:      1 MEHSRIK-KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDR------LNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR
Sbjct:      1 MADPATRETVRVVVADDHPLFREGVVRALVSSGA--VNVVGEAEDGSAALELIKSHQPDVAL--LDYRMPGMDGAQVAAAVRADGLATRVLLISAHDESAIVYQALQQGAAGFVLKDSTRSEIVKAVLDCAQGRDVVAPALVGGLAAEIRQRAEPTGPVLSAREREVLHRIARGQSIPAIAGELYVAPSTVKTHVQRLYEKLGVSDRAAAVAEAMRQGLLS

NP_865127.1   nitrate/nitrite regulatory protein narP [Rhodopirellula baltica SH 1]
Length: 210. Score: 399. Identity: 15%. E-value: 5E-37.
Query:      9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNN--------QWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM
Sbjct:      3 KRLLIVDDHEVSRLGTLAALE---GTGIEVVAQADKAADALEIVSNTP--LDTVLLDIRMEGGDGLNTLGRIKLDHPDLPILLFSGYDNPTYVARAVALGACGYILKTAPVSRLIEALNLAFDGQQSWTREELRRVTGALATPRMNQDIDVPLTQRESEVLRQMALGLTNKEIAKMLGISYETVKEHVQHILRKLGVSDRTQAAVWAVRKNLV

YP_677878.1   two-component response regulator [Cytophaga hutchinsonii ATCC 33406]
Length: 227. Score: 399. Identity: 15%. E-value: 6E-37.
Query:      6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQ----------------ATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLE
Sbjct:      3 TKKIKVFIADDHEIFRDGVRQLISNESD--MEVVGTASSGEEALELLKDNHADV--VIMDIRMSGMNGLETSRAILKNDSNTHILFFSLYDRDDYVVTALEMGASGYILKDTSNKIFLKGIRAVSNGQFYFTGDVTDVLIKKYKELKDVKNTPEISSSSIQSSLSKREYQILNRIREGKTNKEIAEEYNLSVRTVETHRMNILRKFNVSNFDELIK

YP_516573.1   hypothetical protein DSY0340 [Desulfitobacterium hafniense Y51]
Length: 234. Score: 399. Identity: 14%. E-value: 6E-37.
Query:      8 KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE-RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVR---------QATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR
Sbjct:     20 PIRILIGDDHAIVRSGLTMLINS--HDDMEVVGTAADGRETFELAMKLKPDVIL--LDLSMPPGENGLSATLRIKDAAPEIQILILTMHDDEEYIFKILQAGASGYILKSAYDNDLINAIRTIYHGNAYLGPSITKTLIHEFAQRSLHGNESGTDLTVREQNFLSLMAMGYSNKEIAEELSVSVKTVESYRSKIKDKLNLKTRHELVRYALKKGLMD
PairsDB was developed by Prof. Liisa Holm and Dr. Andreas Heger, and it is maintained jointly with CSC.
The current PairsDB version is based on a sequence set collected on February 2009.