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P0AAM7 is a cross-reference for ZP_05432951.1, which is represented by C1HJ64 in NRDB40.

SetShortcutsAcc.No.IdentifierDatabaseDescription
NRDBIBPZP_05432951.1 256019086 RefSeqhydrogenase 2 accessory protein HypG [Shigella sp. D9]
NRDB40IBPC1HJ64 C1HJ64_9ESCH UniProtHydrogenase isoenzymes formation protein hypC - Escherichia sp. 3_2_53FAA

PSI-BLAST Results for C1HJ64 against NRDB40

Filtering conditions for the hit sequences

  • E-value is less than
Matches:
[1-50][51-100] [101-111]
Match Overview | Stacked Multiple Alignment | Pairwise Alignments

Match Overview

199
 Score E-value Shortcuts Acc.No. Description
-IBP C1HJ64Hydrogenase isoenzymes formation protein hypC - Escherichia sp. 3_2_53FAA
217 3E-16 IBP YP_001406436.1hydrogenase assembly chaperone HypC/HupF [Campylobacter hominis ATCC BAA-381]
213 7E-16 IBP YP_003132692.1hydrogenase assembly chaperone HypC/HupF [Saccharomonospora viridis DSM 43017]
213 8E-16 IBP ZP_01871496.1hydrogenase isoenzyme formation protein HypC [Caminibacter mediatlanticus TB-2]
212 9E-16 IBP YP_866396.1hydrogenase assembly chaperone hypC/hupF [Magnetococcus sp. MC-1]
209 2E-15 IBP ZP_03314283.1hypothetical protein PROVRUST_01068 [Providencia rustigianii DSM 4541]
208 3E-15 IBP YP_463688.1hydrogenase assembly chaperone hypC/hupF [Anaeromyxobacter dehalogenans 2CP-C]
208 3E-15 IBP ZP_05001441.1hydrogenase expression/formation protein [Streptomyces sp. Mg1]
207 4E-15 IBP ZP_03273568.1hydrogenase assembly chaperone hypC/hupF [Arthrospira maxima CS-328]
207 4E-15 IBP YP_001135239.1hydrogenase assembly chaperone hypC/hupF [Mycobacterium gilvum PYR-GCK]
205 7E-15 IBP YP_001191027.1hydrogenase assembly chaperone hypC/hupF [Metallosphaera sedula DSM 5348]
200 2E-14 IBP NP_768375.1hydrogenase maturation protein [Bradyrhizobium japonicum USDA 110]
201 2E-14 IBP NP_942657.1HypC1 [Ralstonia eutropha H16]
200 3E-14 IBP NP_662674.1hydrogenase assembly chaperone HypC/HupF [Chlorobium tepidum TLS]
198 4E-14 IBP C4SQ46Frd operon uncharacterized protein C - Yersinia frederiksenii ATCC 33641
198 4E-14 IBP C0B5J3Putative uncharacterized protein - Coprococcus comes ATCC 27758
197 5E-14 IBP C1SFF9Hydrogenase assembly chaperone HypC/HupF - Cryptobacterium curtum DSM 15641
197 5E-14 IBP YP_001805375.1putative hydrogenase expression/formation protein [Cyanothece sp. ATCC 51142]
196 8E-14 IBP ZP_05007677.1hydrogenase expression/formation protein [Streptomyces clavuligerus ATCC 27064]
194 1E-13 IBP YP_393941.1hydrogenase expression/formation protein (HUPF/HYPC) [Sulfurimonas denitrificans DSM 1251]
194 1E-13 IBP C5ZWB4Putative hydrogenase - Helicobacter canadensis MIT 98-5491
193 1E-13 IBP ZP_05363429.1hydrogenase assembly chaperone HypC/HupF [Campylobacter showae RM3277]
195 1E-13 IBP YP_064314.1hydrogenase accessory protein HypC [Desulfotalea psychrophila LSv54]
194 1E-13 IBP B7R3X4Hydrogenase assembly chaperone HypC/HupF - Thermococcus sp. AM4
192 2E-13 IBP C0BHB3Hydrogenase assembly chaperone hypC/hupF - Flavobacteria bacterium MS024-2A
187 8E-13 IBP C2A2A9Hydrogenase assembly chaperone HypC/HupF - Sulfurospirillum deleyianum DSM 6946
187 8E-13 IBP YP_388632.1hydrogenase assembly chaperone hypC/hupF [Desulfovibrio desulfuricans subsp. desulfuricans str. G20]
185 1E-12 IBP NP_613514.1hydrogenase maturation factor [Methanopyrus kandleri AV19]
186 1E-12 IBP ZP_02177069.1hydrogenase assembly chaperone hypC/hupF [Hydrogenivirga sp. 128-5-R1-1]
186 1E-12 IBP ZP_01287795.1Hydrogenase expression/formation protein (HUPF/HYPC) [delta proteobacterium MLMS-1]
183 2E-12 IBP B9L1W9Hydrogenase assembly chaperone HypC/HupF - Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2)
184 2E-12 IBP C4V236Hydrogenase assembly chaperone hypC/hupF - Selenomonas flueggei ATCC 43531
182 3E-12 IBP YP_002016307.1hydrogenase assembly chaperone hypC/hupF [Prosthecochloris aestuarii DSM 271]
182 3E-12 IBP Q2EMV3Hydrogenase maturation chaperone - Methanococcus voltae
181 4E-12 IBP C0QQ50Hydrogenase assembly chaperone HypC/HupF - Persephonella marina (strain DSM 14350 / EX-H1)
181 4E-12 IBP Q1KZV3HupF - Bradyrhizobium sp. UPM1029
181 4E-12 IBP Q1PUX5Similar to biotin synthase - Candidatus Kuenenia stuttgartiensis
179 7E-12 IBP C3JKL5Hydrogenase assembly chaperone HypC/hupF - Rhodococcus erythropolis SK121
178 9E-12 IBP ZP_01748547.1Hydrogenase expression/formation protein HypC [Sagittula stellata E-37]
178 9E-12 IBP YP_942642.1hydrogenase assembly chaperone hypC/hupF [Psychromonas ingrahamii 37]
177 1E-11 IBP NP_859855.1hydrogenase isoenzyme formation protein HypC [Helicobacter hepaticus ATCC 51449]
177 1E-11 IBP YP_001821379.1hydrogenase assembly chaperone hypC/hupF [Opitutus terrae PB90-1]
177 1E-11 IBP 3D3R-Ahydrogenase assembly chaperone hypc/hupf - [ shewanella oneidensis mr-1]
174 2E-11 IBP YP_738207.1hydrogenase assembly chaperone hypC/hupF [Shewanella sp. MR-7]
176 2E-11 IBP NP_939052.1putative hydrogenase operon protein [Corynebacterium diphtheriae NCTC 13129]
173 3E-11 IBP C1DUE8Hydrogenase assembly chaperone HypC/HupF - Sulfurihydrogenibium azorense (strain Az-Fu1 / DSM 15241 / OCM 825)
173 3E-11 IBP YP_001358955.1hydrogenase expression/formation protein HupF/HypC [Sulfurovum sp. NBC37-1]
172 4E-11 IBP YP_750794.1hydrogenase assembly chaperone hypC/hupF [Shewanella frigidimarina NCIMB 400]
172 4E-11 IBP YP_002311968.1Hydrogenase expression/formation protein (HUPF/HYPC) [Shewanella piezotolerans WP3]
172 5E-11 IBP ZP_01852862.1hypothetical protein PM8797T_02774 [Planctomyces maris DSM 8797]

Stacked Multiple Aligment

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The representative sequence for the query:      MAELAGDTAMCIGVPGQIRTIDGNQAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINEAEARDTLDALQNMFDVEPDVGALLYGEEK
C1HJ64               Hydrogenase isoenzymes for MAELAGDTAMCIGVPGQIRTIDGNQAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINEAEARDTLDALQNMFDVEPDVGALLYGEEK
YP_001406436.1       hydrogenase assembly chape ---------MCLSIPSKIIEIDNNFATVETLGVRRGVSLDLISEP-----LKIGDYVLIHVGFAMEKIDTQYALQSLATYKEIVSQMH-----------
YP_003132692.1       hydrogenase assembly chape ---------MCLGIPGEVVELRPDLARVNVSGVRRAINIGLL----ENDPPEPGDWVLIHVGFALSKIDEEEAAAVLRYLEELGSAYTDEMDALSQS--
ZP_01871496.1        hydrogenase isoenzyme form ---------MCLAIPSKVLEIDNNIAKVDTLGVIREVSLDLIQE-----EVKVGDYVLIHVGYAMNKIDEKAALESLEVYKMLADAAKDVD--------
YP_866396.1          hydrogenase assembly chape ---------MCLGIPMEVTSVEGYIAQCSAKGITREVSLFMVQHEH----IEPGDHVMVHVGYAIQKMSAAEARTTWELLDETLAAMDAQTQQDAGSD-
ZP_03314283.1        hypothetical protein PROVR ---------MCLGIPGKIVAVGEDIAQVDVCGVKRDVNIGLI--CEGDTAELLGQWVLVHVGFAMSIINEEEAQATLDALMAMSQLDHEVGDF------
YP_463688.1          hydrogenase assembly chape ---------MCLGVPGKVIAIDGLDATVDFFGVRKSLRLDIV-----DEPVQVGDYVLNHVGFAIRRIPPEEVQETLALFDQILEVSGAKEDLMAAD--
ZP_05001441.1        hydrogenase expression/for ---------MCLAVPGRVLDIGEKMATVDFGGVVKEVCLEYLPD------LQVGEYAIVHVGFALQRLDEESAKQTLELFAQLGMLQEEFGDP------
ZP_03273568.1        hydrogenase assembly chape ---ILGMKYMCLAVPGKLVSISGDKGRVSFGGVIKEVSLAYVP------EAQVGDYVLVHVGFALSRVEPEDALQTLADLQQMVKLG------------
YP_001135239.1       hydrogenase assembly chape ---------MCLAVPGRILSIHETMSVVDFGGIRKNVCLQYLPD------AQVGQYVVVHVGFAIQRLDEESARRTLAEFAHLGVLDEEFADGFASA--
YP_001191027.1       hydrogenase assembly chape ---------MCVAFPGKVIEISGDFGKIDFGNGTIRDNILL-----SLVNAQIGDYVLVHAGYAIQVIDEDEARRTIEIWNEMTKDLSHE---------
NP_768375.1          hydrogenase maturation pro ---------MCLSVPAKIAKIPNEMALVFIDGVNLEISIALLDELD------VGDFVLVHVGYALAKIDPAEAKRTLELLQELGAAKE-----------
NP_942657.1          HypC1 [Ralstonia eutropha  ---------MCLAIPARLVELQDQQGVVDLSGVRKTISLALMAD------AVVGDYVIVHVGYAIGKIDPEEAERTLRLFAELERVQPPASEPMHG---
NP_662674.1          hydrogenase assembly chape --------TMCLAIPGQVIEIREEMGTVDISGALTKACLEYVP------EIAIGQYTIVHAGFALKIIDEKEAAESLKLWDELIKSG------------
C4SQ46               Frd operon uncharacterized -------------------ETQPGTAWVDVCGVRRSVNIMLVAADESSSSALIGHWVLVHVGFAMSRLDEDEALETLQLLQAMGEVETDVRSFL-----
C0B5J3               Putative uncharacterized p -----GITHMCVGLSAKVVKISNGTAVVDAGGAKREVSSKLLENLE------PGDYVMVHAGVAIAKITDEDESETDQLMEELL---------------
C1SFF9               Hydrogenase assembly chape -SAINKEKAMCLAIPAQITQREDNMAEVNIMGVTRDISIDLTPDAAE------GDYVLVHAGFAIEVVDPQFAEETLDLVKQFPDMVAEE---------
YP_001805375.1       putative hydrogenase expre ---------MCLAVPGKVVSISQDKGKVSFGGVIKEVSLAYVP------EVEINDYVIVHVGFALSILDQEAAEKSLAEFREMETILSMEQSLTSQSD-
ZP_05007677.1        hydrogenase expression/for ---------MCLAVPGRVMEIEERMAVVDFGGVVKDVCLEYLPD------LAVGEYAIVHVGFALQRLDEESALRTLELFAELGLLQEEFGDP------
YP_393941.1          hydrogenase expression/for ---------MCLSIPSKVVKIDNEVATVDTMGVQREASLSLMSE----EEISIGDYVLLHIGFVMNKIDEAEALDSLALY-------------------
C5ZWB4               Putative hydrogenase - Hel ---------MCLAIPSKVIAIDSNTATLDTLGVTREASLDLM-----NEEVNIGDYVLLHIGYVMGKIDEEQAKLSLETY-------------------
ZP_05363429.1        hydrogenase assembly chape ---------MCLSIPSKVVAIDDNVATVETLGVSRRVSLDLIAEP-----VAVGEYVLIHVGYAMEKIDTKFALESIEIYRQIAKDMEDEGDAGLGA--
YP_064314.1          hydrogenase accessory prot ---------MCLAIPMRVTKVEGDIATVDVDGISKEIRLDIVDH-----WPSIGDYLIIHAGFAIHSLEPKEAERNLELLRELAASTPDE---------
B7R3X4               Hydrogenase assembly chape ---------MCLATVAKVLEVDRETAWVDFGGVKREARIDLMPD------VKPGEYVLIHTGFIIERVDEETAKEILSAWDEVFKLEKDA---------
C0BHB3               Hydrogenase assembly chape --------FMCLAVPGKIIGFDDKIGKVSFDGIIKKINLGLVPEAKE------GDYVLVHVGVAMSVVDEEEAKRTMDFL-----LGTDELDDIRPDDE
C2A2A9               Hydrogenase assembly chape ---------MCLSIPSKVVEIDNNYATVDTLGVKRKVTLDLI-----VEPVEVGDYVLIHVGFAMNKISK-----------------------------
YP_388632.1          hydrogenase assembly chape ---------MCLAIPAEVNELDGDMAKCRVGKSDTFVN---VSTMLLEEPAAVGDFLIVHAGFALRKLDPAEAQESLRLLRQMANIEEG----------
NP_613514.1          hydrogenase maturation fac ---------MCLAIPGRIVELDGNRAVVDFGGVRQEVDVSLLEDVEE------GDWVIVHTGFAIQKLDE-----------------------------
ZP_02177069.1        hydrogenase assembly chape ---------MCLAIPSKVIEIHDGTATVDTMGVKRKISLELMG-----EEVNPGDYVLIHVGFAIQKLNE-----------------------------
ZP_01287795.1        Hydrogenase expression/for ---------MCLAVPGKVVEIFEEMGHIDYAGALSKACLEYVP------EIRVGEYTVVHAGFALSILDEEEAAKSFAAWRELREAAAREGVDLFG---
B9L1W9               Hydrogenase assembly chape ---------MCLAIPGQVIDLDTDVALVNVLGVRRRINVELV----WDDGLQAGDWVLIHVGFALSKVSEAEAAAQLRLLEALGEDAQAMEE-------
C4V236               Hydrogenase assembly chape ---------MCLAVPAKVVEIEDQLASVEVQGVRRAASLMLLP------EAKVGDFVLVHAGFAMQIVDPAEMERIEALRAEMNGAPRTVTHID-----
YP_002016307.1       hydrogenase assembly chape ---------MCLAIPGKLIAISQEMGSVDISGSVTRACLEYVPD------IQVGQYTIVHAGFALKIIDEAEAAESMQVWNELLRAEAEERSAR-----
Q2EMV3               Hydrogenase maturation cha --------NMCLAIPSKVVEIFEEYAVAEYKGVKQKAKLALLED------VSVGDYVLIHTGYALEKLSEEDAKITLDTWEDLFDALDEME--------
C0QQ50               Hydrogenase assembly chape ---------MCLSIPSKIVEIPDNYAVVDTMGVKRKVSLDLMPEP-----VEVGDYVLIHVGYAMTKMSE-----------------------------
Q1KZV3               HupF - Bradyrhizobium sp.  ---------MCLGLPMTIVETDGISALCAYRGEQRPVSVLLLSNP------PVGAKVLVYIDTAIRLLDEDEARLIANAIEGLSAALDGEDCDRFFAD-
Q1PUX5               Similar to biotin synthase ---------MCLTIPAKVLFVEDSPDNLPARRITIRDSKGERSIIALLTDVHAGDWILYASDTAVEKISEDDAREILDLLE------------------
C3JKL5               Hydrogenase assembly chape ---------MCLGIPGRVRELLDGYALVDVEGAPRKVNIGMLDE----GTVTAGDWVVIHMGFAVEKVDEQGARHARAGLELMGRGGHDGEIVDSG---
ZP_01748547.1        Hydrogenase expression/for ---------MCLGIPGQIIEVTDEMALASVSGVRREVNVACV--ATGALEDLVGQWALIHVGFAMSLIDEDEAAKTLEALRGLGEAQETLE--------
YP_942642.1          hydrogenase assembly chape ---IIREQTMCLAIPGQVISINQSTAKVNFSGIIREVVVEWI------DQVAVNDYVIVHAGFAISKLDQQAALET-----------------------
NP_859855.1          hydrogenase isoenzyme form ---------MCLAIPSKVVEIDNNMAVVDTLGVSREASLDLL-----NESVNIGDWVLLHIGYVMSKIDE-----------------------------
YP_001821379.1       hydrogenase assembly chape ---------MCLAVPGRILAISGATARVDFGGIVKEVNLACVP------EARLDDYVLVHVGVALSVIDEREAAEVFSYLKQMEELAE-----------
3D3R-A               hydrogenase assembly chape -----------LSIPSQVVAVDNERVTVDTLGVRRDVSSHL-----XTEPLAIGDYVLIHIGFVXNKIDRNDALQSLELYQEI----------------
YP_738207.1          hydrogenase assembly chape ---------MCLSIPSQVVAVDNERVTVDTLGVRRDVSSHLM-----NEPLAIGDYVLIHIGFVMNKIDR-----------------------------
NP_939052.1          putative hydrogenase opero ---------MCLGIPARVVEVLDGMAVVDMAGEQRPCSVMYVP------EVQVGQFVLLQNGYAMEVLDEKSAQESLATIAEFNLVQQVQLAPR-----
C1DUE8               Hydrogenase assembly chape ---------MCLSIPSRVEEIPDETAIVDTMGVKRKVSLHLLPEP-----VDVGDYVLIHVGYAITKMNE-----------------------------
YP_001358955.1       hydrogenase expression/for ---------MCLSIPSKVVKISEDMCTVDTMGVQRDANLMMMDDDD----VKVGDYVLLHIGFVMNRIDEEEALASIDTY-------------------
YP_750794.1          hydrogenase assembly chape ---------MCLSVPSKVVEIHDDTVTVDTLGVKRRVSCHLICDP-----LALGDFVLIHIGFVMNKID------------------------------
YP_002311968.1       Hydrogenase expression/for ---------MCLSIPSQVFEIDEESVTVDTMGVKRKVSSHLM-----TEPLKLGDYVLIHIGFVMNKIDK-----------------------------
ZP_01852862.1        hypothetical protein PM879 ---------MCLGIPGQLVEREGSQAEIEFDGVRRVVHMACV------TEAEVGDYILVHAGIAINRIDAREAQRIFDTLAEWGEDEGHETLPDAGEDE

Pairwise Alignments

C1HJ64   Hydrogenase isoenzymes formation protein hypC - Escherichia sp. 3_2_53FAA
Length: 99. Score: 279. Identity: 100%. E-value: 2E-23.
Query:      1 MAELAGDTAMCIGVPGQIRTIDGNQAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINEAEARDTLDALQNMFDVEPDVGALLYGEEK
Sbjct:      1 MAELAGDTAMCIGVPGQIRTIDGNQAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINEAEARDTLDALQNMFDVEPDVGALLYGEEK

YP_001406436.1   hydrogenase assembly chaperone HypC/HupF [Campylobacter hominis ATCC BAA-381]
Length: 97. Score: 217. Identity: 32%. E-value: 3E-16.
Query:     10 MCIGVPGQIRTID-GNQAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINEAEARDTLDALQNMFDVEP
Sbjct:      1 MCLSIPSKIIEIDENNFATVETLGVRRGVSLDLISEP-----LKIGDYVLIHVGFAMEKIDTQYALQSLATYKEIVSQMH

YP_003132692.1   hydrogenase assembly chaperone HypC/HupF [Saccharomonospora viridis DSM 43017]
Length: 90. Score: 213. Identity: 35%. E-value: 7E-16.
Query:     10 MCIGVPGQIRTI---DGNQAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINEAEARDTLDALQNMFDVEPDVGALLYGE
Sbjct:      1 MCLGIPGEVVELLPDRPDLARVNVSGVRRAINIGLL----ENDPPEPGDWVLIHVGFALSKIDEEEAAAVLRYLEELGSAYTDEMDALSQS

ZP_01871496.1   hydrogenase isoenzyme formation protein HypC [Caminibacter mediatlanticus TB-2]
Length: 106. Score: 213. Identity: 37%. E-value: 8E-16.
Query:     10 MCIGVPGQIRTID-GNQAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINEAEARDTLDALQNMFDVEPDVG
Sbjct:      1 MCLAIPSKVLEIDENNIAKVDTLGVIREVSLDLIQE-----EVKVGDYVLIHVGYAMNKIDEKAALESLEVYKMLADAAKDVD

YP_866396.1   hydrogenase assembly chaperone hypC/hupF [Magnetococcus sp. MC-1]
Length: 87. Score: 212. Identity: 29%. E-value: 9E-16.
Query:     10 MCIGVPGQIRTIDGNQAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINEAEARDTLDALQNMFDVEPDVGALLYGEE
Sbjct:      1 MCLGIPMEVTSVEGYIAQCSAKGITREVSLFMVQHEH----IEPGDHVMVHVGYAIQKMSAAEARTTWELLDETLAAMDAQTQQDAGSD

ZP_03314283.1   hypothetical protein PROVRUST_01068 [Providencia rustigianii DSM 4541]
Length: 98. Score: 209. Identity: 49%. E-value: 2E-15.
Query:     10 MCIGVPGQIRTIDGNQ---AKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINEAEARDTLDALQNMFDVEPDVGAL
Sbjct:      1 MCLGIPGKIVAVGEDIHQLAQVDVCGVKRDVNIGLI--CEGDTAELLGQWVLVHVGFAMSIINEEEAQATLDALMAMSQLDHEVGDF

YP_463688.1   hydrogenase assembly chaperone hypC/hupF [Anaeromyxobacter dehalogenans 2CP-C]
Length: 95. Score: 208. Identity: 34%. E-value: 3E-15.
Query:     10 MCIGVPGQIRTIDGNQAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINEAEARDTLDALQNMFDVEPDVGALLYGE
Sbjct:      1 MCLGVPGKVIAIDGLDATVDFFGVRKSLRLDIV-----DEPVQVGDYVLNHVGFAIRRIPPEEVQETLALFDQILEVSGAKEDLMAAD

ZP_05001441.1   hydrogenase expression/formation protein [Streptomyces sp. Mg1]
Length: 130. Score: 208. Identity: 28%. E-value: 3E-15.
Query:     10 MCIGVPGQIRTIDGN----QAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINEAEARDTLDALQNMFDVEPDVGAL
Sbjct:      1 MCLAVPGRVLDIGEKDGTRMATVDFGGVVKEVCLEYLPD------LQVGEYAIVHVGFALQRLDEESAKQTLELFAQLGMLQEEFGDP

ZP_03273568.1   hydrogenase assembly chaperone hypC/hupF [Arthrospira maxima CS-328]
Length: 88. Score: 207. Identity: 33%. E-value: 4E-15.
Query:      4 LAGDTAMCIGVPGQIRTIDGN-----QAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINEAEARDTLDALQNMFDVE
Sbjct:      6 ILGMKYMCLAVPGKLVSISGDDPLLKKGRVSFGGVIKEVSLAYVP------EAQVGDYVLVHVGFALSRVEPEDALQTLADLQQMVKLG

YP_001135239.1   hydrogenase assembly chaperone hypC/hupF [Mycobacterium gilvum PYR-GCK]
Length: 105. Score: 207. Identity: 30%. E-value: 4E-15.
Query:     10 MCIGVPGQIRTIDG----NQAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINEAEARDTLDALQNMFDVEPDVGALLYGE
Sbjct:      1 MCLAVPGRILSIHERDGTTMSVVDFGGIRKNVCLQYLPD------AQVGQYVVVHVGFAIQRLDEESARRTLAEFAHLGVLDEEFADGFASA

YP_001191027.1   hydrogenase assembly chaperone hypC/hupF [Metallosphaera sedula DSM 5348]
Length: 90. Score: 205. Identity: 29%. E-value: 7E-15.
Query:     10 MCIGVPGQIRTIDGNQAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINEAEARDTLDALQNMFDVEPDV
Sbjct:      1 MCVAFPGKVIEISGDFGKIDFGNGTIRDNILL-----SLVNAQIGDYVLVHAGYAIQVIDEDEARRTIEIWNEMTKDLSHE

NP_768375.1   hydrogenase maturation protein [Bradyrhizobium japonicum USDA 110]
Length: 581. Score: 200. Identity: 35%. E-value: 2E-14.
Query:     10 MCIGVPGQIRTI-DGNQAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINEAEARDTLDALQNMFDVEP
Sbjct:    505 MCLSVPAKIAKILPNEMALVFIDGVNLEISIALLDELD------VGDFVLVHVGYALAKIDPAEAKRTLELLQELGAAKE

NP_942657.1   HypC1 [Ralstonia eutropha H16]
Length: 90. Score: 201. Identity: 28%. E-value: 2E-14.
Query:     10 MCIGVPGQIRTID-GNQAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINEAEARDTLDALQNMFDVEPDVGALLYG
Sbjct:      1 MCLAIPARLVELQADQQGVVDLSGVRKTISLALMAD------AVVGDYVIVHVGYAIGKIDPEEAERTLRLFAELERVQPPASEPMHG

NP_662674.1   hydrogenase assembly chaperone HypC/HupF [Chlorobium tepidum TLS]
Length: 111. Score: 200. Identity: 27%. E-value: 3E-14.
Query:      9 AMCIGVPGQIRTIDGN----QAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINEAEARDTLDALQNMFDVE
Sbjct:     17 TMCLAIPGQVIEIREENGLKMGTVDISGALTKACLEYVP------EIAIGQYTIVHAGFALKIIDEKEAAESLKLWDELIKSG

C4SQ46   Frd operon uncharacterized protein C - Yersinia frederiksenii ATCC 33641
Length: 83. Score: 198. Identity: 46%. E-value: 4E-14.
Query:     20 TIDGNQAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINEAEARDTLDALQNMFDVEPDVGALL
Sbjct:      5 ETQPGTAWVDVCGVRRSVNIMLVAADESSSSALIGHWVLVHVGFAMSRLDEDEALETLQLLQAMGEVETDVRSFL

C0B5J3   Putative uncharacterized protein - Coprococcus comes ATCC 27758
Length: 107. Score: 198. Identity: 26%. E-value: 4E-14.
Query:      6 GDTAMCIGVPGQIRTIDGNQAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINEAEARDTLDALQNMF
Sbjct:     35 GITHMCVGLSAKVVKISNGTAVVDAGGAKREVSSKLLENLE------PGDYVMVHAGVAIAKITDEDESETDQLMEELL

C1SFF9   Hydrogenase assembly chaperone HypC/HupF - Cryptobacterium curtum DSM 15641
Length: 93. Score: 197. Identity: 31%. E-value: 5E-14.
Query:      2 AELAGDTAMCIGVPGQIRTI-DGNQAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINEAEARDTLDALQNMFDVEPDV
Sbjct:      3 SAINKEKAMCLAIPAQITQRKEDNMAEVNIMGVTRDISIDLTPDAAE------GDYVLVHAGFAIEVVDPQFAEETLDLVKQFPDMVAEE

YP_001805375.1   putative hydrogenase expression/formation protein [Cyanothece sp. ATCC 51142]
Length: 94. Score: 197. Identity: 25%. E-value: 5E-14.
Query:     10 MCIGVPGQIRTIDGN-----QAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINEAEARDTLDALQNMFDVEPDVGALLYGEE
Sbjct:      1 MCLAVPGKVVSISQDEPLLRKGKVSFGGVIKEVSLAYVP------EVEINDYVIVHVGFALSILDQEAAEKSLAEFREMETILSMEQSLTSQSD

ZP_05007677.1   hydrogenase expression/formation protein [Streptomyces clavuligerus ATCC 27064]
Length: 107. Score: 196. Identity: 29%. E-value: 8E-14.
Query:     10 MCIGVPGQIRTIDGN----QAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINEAEARDTLDALQNMFDVEPDVGAL
Sbjct:      1 MCLAVPGRVMEIEERDGTRMAVVDFGGVVKDVCLEYLPD------LAVGEYAIVHVGFALQRLDEESALRTLELFAELGLLQEEFGDP

YP_393941.1   hydrogenase expression/formation protein (HUPF/HYPC) [Sulfurimonas denitrificans DSM 1251]
Length: 96. Score: 194. Identity: 36%. E-value: 1E-13.
Query:     10 MCIGVPGQIRTID--GNQAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINEAEARDTLDAL
Sbjct:      1 MCLSIPSKVVKIDRENEVATVDTMGVQREASLSLMSE----EEISIGDYVLLHIGFVMNKIDEAEALDSLALY

C5ZWB4   Putative hydrogenase - Helicobacter canadensis MIT 98-5491
Length: 88. Score: 194. Identity: 31%. E-value: 1E-13.
Query:     10 MCIGVPGQIRTIDGNQ--AKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINEAEARDTLDAL
Sbjct:      1 MCLAIPSKVIAIDSNTNTATLDTLGVTREASLDLM-----NEEVNIGDYVLLHIGYVMGKIDEEQAKLSLETY

ZP_05363429.1   hydrogenase assembly chaperone HypC/HupF [Campylobacter showae RM3277]
Length: 104. Score: 193. Identity: 28%. E-value: 1E-13.
Query:     10 MCIGVPGQIRTID-GNQAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINEAEARDTLDALQNMFDVEP------DVGALLYGE
Sbjct:      1 MCLSIPSKVVAIDEDNVATVETLGVSRRVSLDLIAEP-----VAVGEYVLIHVGYAMEKIDTKFALESIEIYRQIAKDMESGQICADEGDAGLGA

YP_064314.1   hydrogenase accessory protein HypC [Desulfotalea psychrophila LSv54]
Length: 90. Score: 195. Identity: 26%. E-value: 1E-13.
Query:     10 MCIGVPGQIRTIDGN--------QAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINEAEARDTLDALQNMFDVEPDV
Sbjct:      1 MCLAIPMRVTKVEGDPDDFTTNQIATVDVDGISKEIRLDIVDH-----WPSIGDYLIIHAGFAIHSLEPKEAERNLELLRELAASTPDE

B7R3X4   Hydrogenase assembly chaperone HypC/HupF - Thermococcus sp. AM4
Length: 86. Score: 194. Identity: 26%. E-value: 1E-13.
Query:     10 MCIGVPGQIRTIDGN--QAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINEAEARDTLDALQNMFDVEPDV
Sbjct:      1 MCLATVAKVLEVDREKGTAWVDFGGVKREARIDLMPD------VKPGEYVLIHTGFIIERVDEETAKEILSAWDEVFKLEKDA

C0BHB3   Hydrogenase assembly chaperone hypC/hupF - Flavobacteria bacterium MS024-2A
Length: 103. Score: 192. Identity: 34%. E-value: 2E-13.
Query:      9 AMCIGVPGQIRTIDG------NQAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINEAEARDTLDALQNMFDVEPDVGALLYGEEK
Sbjct:     18 FMCLAVPGKIIGFDDTRESVFKIGKVSFDGIIKKINLGLVPEAKE------GDYVLVHVGVAMSVVDEEEAKRTMDFL-----LGTDELDDIRPDDE

C2A2A9   Hydrogenase assembly chaperone HypC/HupF - Sulfurospirillum deleyianum DSM 6946
Length: 89. Score: 187. Identity: 40%. E-value: 8E-13.
Query:     10 MCIGVPGQIRTID-GNQAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINE
Sbjct:      1 MCLSIPSKVVEIDENNYATVDTLGVKRKVTLDLI-----VEPVEVGDYVLIHVGFAMNKISK

YP_388632.1   hydrogenase assembly chaperone hypC/hupF [Desulfovibrio desulfuricans subsp. desulfuricans str. G20]
Length: 83. Score: 187. Identity: 29%. E-value: 8E-13.
Query:     10 MCIGVPGQIRTI-DGNQAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINEAEARDTLDALQNMFDVEPD
Sbjct:      1 MCLAIPAEVNELLDGDMAKCRVGKSDTFVN---VSTMLLEEPAAVGDFLIVHAGFALRKLDPAEAQESLRLLRQMANIEEG

NP_613514.1   hydrogenase maturation factor [Methanopyrus kandleri AV19]
Length: 92. Score: 185. Identity: 40%. E-value: 1E-12.
Query:     10 MCIGVPGQIRTIDGNQAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINE
Sbjct:      1 MCLAIPGRIVELDGNRAVVDFGGVRQEVDVSLLEDVEE------GDWVIVHTGFAIQKLDE

ZP_02177069.1   hydrogenase assembly chaperone hypC/hupF [Hydrogenivirga sp. 128-5-R1-1]
Length: 89. Score: 186. Identity: 35%. E-value: 1E-12.
Query:     10 MCIGVPGQIRTID-GNQAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINE
Sbjct:      1 MCLAIPSKVIEIHGDGTATVDTMGVKRKISLELMG-----EEVNPGDYVLIHVGFAIQKLNE

ZP_01287795.1   Hydrogenase expression/formation protein (HUPF/HYPC) [delta proteobacterium MLMS-1]
Length: 98. Score: 186. Identity: 28%. E-value: 1E-12.
Query:     10 MCIGVPGQIRTIDGN----QAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINEAEARDTLDALQNMFDVEPDVGALLYG
Sbjct:      1 MCLAVPGKVVEIFEEHGMRMGHIDYAGALSKACLEYVP------EIRVGEYTVVHAGFALSILDEEEAAKSFAAWRELREAAAREGVDLFG

B9L1W9   Hydrogenase assembly chaperone HypC/HupF - Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2)
Length: 91. Score: 183. Identity: 34%. E-value: 2E-12.
Query:     10 MCIGVPGQIRTIDGN--QAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINEAEARDTLDALQNMFDVEPDVGA
Sbjct:      1 MCLAIPGQVIDLDTDSRVALVNVLGVRRRINVELV----WDDGLQAGDWVLIHVGFALSKVSEAEAAAQLRLLEALGEDAQAMEE

C4V236   Hydrogenase assembly chaperone hypC/hupF - Selenomonas flueggei ATCC 43531
Length: 87. Score: 184. Identity: 30%. E-value: 2E-12.
Query:     10 MCIGVPGQIRTIDGNQAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINEAEARDTLDALQNMFDVEPDVGALL
Sbjct:      1 MCLAVPAKVVEIEDQLASVEVQGVRRAASLMLLP------EAKVGDFVLVHAGFAMQIVDPAEMERIEALRAEMNGAPRTVTHID

YP_002016307.1   hydrogenase assembly chaperone hypC/hupF [Prosthecochloris aestuarii DSM 271]
Length: 86. Score: 182. Identity: 26%. E-value: 3E-12.
Query:     10 MCIGVPGQIRTIDGN----QAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINEAEARDTLDALQNMFDVEPDVGALL
Sbjct:      1 MCLAIPGKLIAISQEHGLKMGSVDISGSVTRACLEYVPD------IQVGQYTIVHAGFALKIIDEAEAAESMQVWNELLRAEAEERSAR

Q2EMV3   Hydrogenase maturation chaperone - Methanococcus voltae
Length: 103. Score: 182. Identity: 25%. E-value: 3E-12.
Query:      9 AMCIGVPGQIRTIDGN----QAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINEAEARDTLDALQNMFDVEPDVG
Sbjct:      4 NMCLAIPSKVVEIFEEDGEKYAVAEYKGVKQKAKLALLED------VSVGDYVLIHTGYALEKLSEEDAKITLDTWEDLFDALDEME

C0QQ50   Hydrogenase assembly chaperone HypC/HupF - Persephonella marina (strain DSM 14350 / EX-H1)
Length: 81. Score: 181. Identity: 38%. E-value: 4E-12.
Query:     10 MCIGVPGQIRTI-DGNQAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINE
Sbjct:      1 MCLSIPSKIVEILPDNYAVVDTMGVKRKVSLDLMPEP-----VEVGDYVLIHVGYAMTKMSE

Q1KZV3   HupF - Bradyrhizobium sp. UPM1029
Length: 109. Score: 181. Identity: 26%. E-value: 4E-12.
Query:     10 MCIGVPGQIRTIDGNQAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINEAEARDTLDALQNMFDVEPDVGALLYGEE
Sbjct:      1 MCLGLPMTIVETDGISALCAYRGEQRPVSVLLLSNP------PVGAKVLVYIDTAIRLLDEDEARLIANAIEGLSAALDGEDCDRFFAD

Q1PUX5   Similar to biotin synthase - Candidatus Kuenenia stuttgartiensis
Length: 454. Score: 181. Identity: 20%. E-value: 4E-12.
Query:     10 MCIGVPGQIRTIDGNQAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINEAEARDTLDALQ
Sbjct:     28 MCLTIPAKVLFVEDSPDNLPARRITIRDSKGERSIIALLTDVHAGDWILYASDTAVEKISEDDAREILDLLE

C3JKL5   Hydrogenase assembly chaperone HypC/hupF - Rhodococcus erythropolis SK121
Length: 95. Score: 179. Identity: 30%. E-value: 7E-12.
Query:     10 MCIGVPGQIRTIDGNQ----AKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINEAEARDTLDALQNMFDVEPDVGALLYG
Sbjct:      1 MCLGIPGRVRELLDGYGGQLALVDVEGAPRKVNIGMLDE----GTVTAGDWVVIHMGFAVEKVDEQGARHARAGLELMGRGGHDGEIVDSG

ZP_01748547.1   Hydrogenase expression/formation protein HypC [Sagittula stellata E-37]
Length: 104. Score: 178. Identity: 38%. E-value: 9E-12.
Query:     10 MCIGVPGQIRTIDGN---QAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINEAEARDTLDALQNMFDVEPDVG
Sbjct:      1 MCLGIPGQIIEVTDEARMMALASVSGVRREVNVACV--ATGALEDLVGQWALIHVGFAMSLIDEDEAAKTLEALRGLGEAQETLE

YP_942642.1   hydrogenase assembly chaperone hypC/hupF [Psychromonas ingrahamii 37]
Length: 84. Score: 178. Identity: 31%. E-value: 9E-12.
Query:      4 LAGDTAMCIGVPGQIRTIDGN----QAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINEAEARDT
Sbjct:      2 IIREQTMCLAIPGQVISINQSASPITAKVNFSGIIREVVVEWI------DQVAVNDYVIVHAGFAISKLDQQAALET

NP_859855.1   hydrogenase isoenzyme formation protein HypC [Helicobacter hepaticus ATCC 51449]
Length: 86. Score: 177. Identity: 38%. E-value: 1E-11.
Query:     10 MCIGVPGQIRTI-DGNQAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINE
Sbjct:      1 MCLAIPSKVVEIKDNNMAVVDTLGVSREASLDLL-----NESVNIGDWVLLHIGYVMSKIDE

YP_001821379.1   hydrogenase assembly chaperone hypC/hupF [Opitutus terrae PB90-1]
Length: 94. Score: 177. Identity: 38%. E-value: 1E-11.
Query:     10 MCIGVPGQIRTIDGN----QAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINEAEARDTLDALQNMFDVEP
Sbjct:      1 MCLAVPGRILAISGADFFRTARVDFGGIVKEVNLACVP------EARLDDYVLVHVGVALSVIDEREAAEVFSYLKQMEELAE

3D3R-A   hydrogenase assembly chaperone hypc/hupf - [  shewanella oneidensis mr-1]
Length: 83. Score: 177. Identity: 27%. E-value: 1E-11.
Query:     12 IGVPGQIRTIDGNQ--AKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINEAEARDTLDALQNM
Sbjct:     10 LSIPSQVVAVDNERQSVTVDTLGVRRDVSSHL-----XTEPLAIGDYVLIHIGFVXNKIDRNDALQSLELYQEI

YP_738207.1   hydrogenase assembly chaperone hypC/hupF [Shewanella sp. MR-7]
Length: 81. Score: 174. Identity: 33%. E-value: 2E-11.
Query:     10 MCIGVPGQIRTIDGNQ--AKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINE
Sbjct:      1 MCLSIPSQVVAVDNERQSVTVDTLGVRRDVSSHLM-----NEPLAIGDYVLIHIGFVMNKIDR

NP_939052.1   putative hydrogenase operon protein [Corynebacterium diphtheriae NCTC 13129]
Length: 85. Score: 176. Identity: 28%. E-value: 2E-11.
Query:     10 MCIGVPGQIRTIDGN---QAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINEAEARDTLDALQNMFDVEPDVGALL
Sbjct:      1 MCLGIPARVVEVLDGPLPMAVVDMAGEQRPCSVMYVP------EVQVGQFVLLQNGYAMEVLDEKSAQESLATIAEFNLVQQVQLAPR

C1DUE8   Hydrogenase assembly chaperone HypC/HupF - Sulfurihydrogenibium azorense (strain Az-Fu1 / DSM 15241 / OCM 825)
Length: 80. Score: 173. Identity: 35%. E-value: 3E-11.
Query:     10 MCIGVPGQIRTI-DGNQAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINE
Sbjct:      1 MCLSIPSRVEEIFPDETAIVDTMGVKRKVSLHLLPEP-----VDVGDYVLIHVGYAITKMNE

YP_001358955.1   hydrogenase expression/formation protein HupF/HypC [Sulfurovum sp. NBC37-1]
Length: 104. Score: 173. Identity: 31%. E-value: 3E-11.
Query:     10 MCIGVPGQIRTIDGN--QAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINEAEARDTLDAL
Sbjct:      1 MCLSIPSKVVKISEDKTMCTVDTMGVQRDANLMMMDDDD----VKVGDYVLLHIGFVMNRIDEEEALASIDTY

YP_750794.1   hydrogenase assembly chaperone hypC/hupF [Shewanella frigidimarina NCIMB 400]
Length: 80. Score: 172. Identity: 31%. E-value: 4E-11.
Query:     10 MCIGVPGQIRTIDGN-QAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVIN
Sbjct:      1 MCLSVPSKVVEIHDDATVTVDTLGVKRRVSCHLICDP-----LALGDFVLIHIGFVMNKID

YP_002311968.1   Hydrogenase expression/formation protein (HUPF/HYPC) [Shewanella piezotolerans WP3]
Length: 81. Score: 172. Identity: 31%. E-value: 4E-11.
Query:     10 MCIGVPGQIRTI--DGNQAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINE
Sbjct:      1 MCLSIPSQVFEIHQDEESVTVDTMGVKRKVSSHLM-----TEPLKLGDYVLIHIGFVMNKIDK

ZP_01852862.1   hypothetical protein PM8797T_02774 [Planctomyces maris DSM 8797]
Length: 91. Score: 172. Identity: 29%. E-value: 5E-11.
Query:     10 MCIGVPGQIR---TIDG--NQAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINEAEARDTLDALQNMFDVEP-DVGALLYGEEK
Sbjct:      1 MCLGIPGQLVRWVEREGIFSQAEIEFDGVRRVVHMACV------TEAEVGDYILVHAGIAINRIDAREAQRIFDTLAEWGEDEGWHETLPDAGEDE
PairsDB was developed by Prof. Liisa Holm and Dr. Andreas Heger, and it is maintained jointly with CSC.
The current PairsDB version is based on a sequence set collected on September 2009.